RNA id: AMCG00014820


Basic Information

Item Value
RNA id AMCG00014820
length 669
RNA type mRNA
GC content 0.54
exon number 4
gene id AMCG00014820
representative True

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 32628832 ~ 32641932 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGTGTACGGGAAAGTGCGCCAAGTGCATCGGGGGCTCCCTGTACCCCTTCGCCCTCGTCTGCATCATCTGCAACATCATTCTTTTCTTCCCCGACTGGTCAACGCAATACACCACAGAGGACACCCTTGATGGATCCAGCCGCATCACAGAGGAGGTCAAGTACATGGGGGGGCTGATCGGGGGAGGCATCTTGaTGTTCCTGTCCATTGCGTTTGCGGCTGTGGGCCTGGTGGGTGGCCTGTACAGCTTGGTGACAGCCTCGCTGGGCCTCATCAATGGCCCAACCTGCCTGTACATGAACtggaatacttttaaaatggaaTGGGGAACACCATTCGCAGAGCAACTGGAGAAATTTGACAATAGCAGCTACCTCTTCAACAAGGACAGCTGGAGTTTGTGCAAAGAACCAGAGAACGTGGTGGAGTTCAACATCACTCTGTTCTCAATCATCATGGCTGCCAGCTGCATTGAGATGGTGCTGTGCGCCTTCCAGATAGTCAACGGGTTGTTCGGCTGTCTGTGCGGCACCTGCGGAGACAAGGGGTTGGCCCTTCTGCCTGGCTCTCGCAGGGATTCAGACTTCTTCTGCTGCTCCTCAGAAGCCACTGGCTTTTTCTGCAACCTTCCAAACAGCCCCACTGCAGCTCACAGGAGACCAGACTAG

Function

GO: NA

KEGG:

id description
ko04614 Renin-angiotensin system
ko04976 Bile secretion
ko04974 Protein digestion and absorption

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU91363 lncRNA downstream 54146 32569671 ~ 32574686 (-) True G73117
TU91353 lncRNA downstream 72887 32455306 ~ 32555945 (-) False AMCG00014816
TU91358 lncRNA downstream 105030 32523238 ~ 32523802 (-) True G73112
TU91351 lncRNA downstream 162416 32450422 ~ 32466416 (-) True G73106
TU91322 lncRNA downstream 197881 32430597 ~ 32430951 (-) True G73082
TU91436 lncRNA upstream 66081 32708013 ~ 32708283 (-) True G73181
TU91437 lncRNA upstream 67912 32709844 ~ 32710115 (-) True G73182
TU91438 lncRNA upstream 68865 32710797 ~ 32711045 (-) True G73183
TU91439 lncRNA upstream 69315 32711247 ~ 32711703 (-) True G73184
TU91443 lncRNA upstream 147091 32789023 ~ 32790398 (-) True G73187
AMCG00014816 mRNA downstream 73299 32502317 ~ 32555533 (-) True AMCG00014816
AMCG00014814 mRNA downstream 306073 32321974 ~ 32322759 (-) True AMCG00014814
AMCG00014813 mRNA downstream 342896 32270685 ~ 32285936 (-) True AMCG00014813
AMCG00014809 mRNA downstream 659609 31967444 ~ 31969223 (-) True AMCG00014809
AMCG00014806 mRNA downstream 839095 31769573 ~ 31789737 (-) True AMCG00014806
AMCG00014819 mRNA upstream 5602 32647534 ~ 32648995 (-) True AMCG00014819
AMCG00014818 mRNA upstream 8244 32650176 ~ 32653420 (-) True AMCG00014818
AMCG00014823 mRNA upstream 149949 32791881 ~ 32793425 (-) True AMCG00014823
AMCG00014824 mRNA upstream 153073 32795005 ~ 32806293 (-) False AMCG00014824
AMCG00014825 mRNA upstream 428874 33070806 ~ 33119328 (-) False AMCG00014825
TU91374 other downstream 9683 32597462 ~ 32619149 (-) False G73127
TU91373 other downstream 14026 32597462 ~ 32614806 (-) True G73127
TU91283 other downstream 365405 32263167 ~ 32263427 (-) True G73047
TU90581 other downstream 3230527 29389290 ~ 29398305 (-) True G72477
TU90285 other downstream 4296350 28329739 ~ 28332482 (-) True G72236
TU91480 other upstream 159926 32801858 ~ 32806295 (-) True AMCG00014824
TU91607 other upstream 2127651 34769583 ~ 34769979 (-) True G73328
TU91914 other upstream 2938694 35580626 ~ 35608677 (-) True AMCG00014839
TU91940 other upstream 3459426 36101358 ~ 36182351 (-) True G73604
TU91951 other upstream 3611842 36253774 ~ 36254187 (-) True G73612

Expression Profile