RNA id: TU86944


Basic Information

Item Value
RNA id TU86944
length 205
lncRNA type inter_gene
GC content 0.37
exon number 1
gene id G69610
representative True

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 11221070 ~ 11221274 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

caaaaacattgaatacaGTCTCCAGCAGTGTCTTAGCATAAGCTTGTCTAAAGAAGCAGATGTTAATTCCACAATTGTGAGTTTTGAGTCCCAGCTATGGAAATGCTCTGACAGCAGTGTGAGATGACTTACAGTGATGTATTTAGGCTCTGTAGTAGTTTTAAAGCATACATGATTTTCTAGCATTTCGAAGAAGAGTAATAAA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU86875 lncRNA upstream 259141 10959326 ~ 10961929 (+) True G69556
TU86857 lncRNA upstream 382840 10837204 ~ 10838230 (+) True G69540
TU86811 lncRNA upstream 727674 10493147 ~ 10493396 (+) True G69499
TU86759 lncRNA upstream 997035 10223671 ~ 10224035 (+) True G69457
TU86745 lncRNA upstream 1069157 10147979 ~ 10151913 (+) True AMCG00014345
TU87041 lncRNA downstream 419809 11641083 ~ 11641452 (+) True G69681
TU87100 lncRNA downstream 498044 11719318 ~ 11722767 (+) True G69722
TU87118 lncRNA downstream 562591 11783865 ~ 11784083 (+) True G69739
TU87160 lncRNA downstream 1378830 12600104 ~ 12600313 (+) True G69778
TU87223 lncRNA downstream 1758985 12980259 ~ 12982434 (+) True G69833
AMCG00014369 mRNA upstream 296 11177961 ~ 11220774 (+) True AMCG00014369
AMCG00014361 mRNA upstream 91710 11125399 ~ 11129360 (+) True AMCG00014361
AMCG00014363 mRNA upstream 115220 11097567 ~ 11105850 (+) True AMCG00014363
AMCG00014362 mRNA upstream 134468 11061595 ~ 11086602 (+) True AMCG00014362
AMCG00014355 mRNA upstream 419760 10766636 ~ 10801310 (+) True AMCG00014355
AMCG00014370 mRNA downstream 171115 11392389 ~ 11393405 (+) True AMCG00014370
AMCG00014371 mRNA downstream 319158 11540432 ~ 11561870 (+) True AMCG00014371
AMCG00014373 mRNA downstream 384694 11605968 ~ 11640460 (+) True AMCG00014373
AMCG00014376 mRNA downstream 422754 11644028 ~ 11659546 (+) True AMCG00014376
AMCG00014378 mRNA downstream 446882 11668156 ~ 11678181 (+) True AMCG00014378
TU86705 other upstream 1212422 10003058 ~ 10008648 (+) True G69406
TU86046 other upstream 3804476 7413640 ~ 7416594 (+) True G68848
TU86015 other upstream 3871603 7346195 ~ 7349467 (+) True G68830
TU85565 other upstream 6569106 4649200 ~ 4651964 (+) True G68475
TU87778 other downstream 3115584 14336858 ~ 14356868 (+) False AMCG00014461
TU88057 other downstream 4454357 15675631 ~ 15679788 (+) True AMCG00014490
TU88058 other downstream 4454357 15675631 ~ 15679788 (+) False AMCG00014490
TU88218 other downstream 4908251 16129525 ~ 16132802 (+) False AMCG00014508
TU88385 other downstream 5244407 16465681 ~ 16469113 (+) False AMCG00014525

Expression Profile