RNA id: AMCG00015506


Basic Information

Item Value
RNA id AMCG00015506
length 791
RNA type mRNA
GC content 0.57
exon number 7
gene id AMCG00015506
representative True

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 10431798 ~ 10437010 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

GAGGCGCTGCTGCCCGGCACCGTCTCagaagggaagggaaaaaataaataaaaaaccaagattgtttggaaatatatatttgtatagaaatatataaaagatgcccagtaaaaagaagaaatacaacGCCAGGTTCCCCCCGGCGAGAATAAAGAAGATTATGCAGACAGACGAGGAGATTGGCAAAGTAGCGGCGGCGGTCCCTGTCATTATCTCTCGGGCTCTCGAACTCTTCTTGGAATCCCTTCTGACGAAAGCCTGCCAGGTCACGCAGTCACGGAACGCCAAGACCATGACCACGTCACACCTgaagCAGTGTATCGAGCTGGAACAACAGTTTGACTTCCTGAAGGACCTGGTGGCGGCAGTGCCGGACATGCAGGGGGACAGCGAGGACAACCACGCCGAGGGGGGGGAGAAGGTTCCACGCAGAGGCCGAAAGCCAGGCTCGGGGAGGAAGAACGGGGGTGCTGGCACCAAGGGCAAAGACAAGAAACAGTCGGGCACAGAGTCTGAACCGGAGGATGACTCTGAAGACACTGAGACGGACGGGGAGGAGGACGTGTCCCAGCCAAGCACAAACCAGCAACCCGCTGCCAGAATCCAGAGCCCGAGTTTGCCCCCCCCTTATCTGCACATGGGGGCGCCGCAGGGAAGCCTGGTCATGCCCCTGGGCAACTTGATGCCCCCCTCCTCGTTGCTGGGCTCTGCCccacctgcccccccaccccacgaGGATGACGATGACGACGAAGACTACGACTCCTAGctgccccctcctccctcccccg

Function

GO:

id name namespace
GO:0005634 nucleus cellular_component
GO:0043565 sequence-specific DNA binding molecular_function
GO:0046982 protein heterodimerization activity molecular_function

KEGG:

id description
K21752 DRAP1, NC2-alpha; Dr1-associated corepressor

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU122588 lncRNA downstream 51749 10378285 ~ 10380049 (-) True AMCG00015501
TU122570 lncRNA downstream 90930 10288026 ~ 10340868 (-) True G98269
TU122498 lncRNA downstream 209273 10173101 ~ 10222525 (-) True G98216
TU122493 lncRNA downstream 266401 10107233 ~ 10165397 (-) True G98211
TU122438 lncRNA downstream 355905 10026114 ~ 10075893 (-) True G98163
TU122626 lncRNA upstream 52569 10489579 ~ 10493106 (-) True G98314
TU122734 lncRNA upstream 230879 10667889 ~ 10704395 (-) False AMCG00015519
TU122740 lncRNA upstream 271411 10708421 ~ 10708752 (-) True G98399
TU122857 lncRNA upstream 411279 10848289 ~ 10849258 (-) False AMCG00015524
TU122894 lncRNA upstream 706508 11143518 ~ 11149864 (-) True G98510
AMCG00015507 mRNA downstream 26942 10394444 ~ 10404856 (-) True AMCG00015507
AMCG00015501 mRNA downstream 46419 10379770 ~ 10385379 (-) False AMCG00015501
AMCG00015500 mRNA downstream 75833 10353209 ~ 10355965 (-) True AMCG00015500
AMCG00015499 mRNA downstream 97661 10298043 ~ 10334137 (-) True AMCG00015499
AMCG00015494 mRNA downstream 161486 10267939 ~ 10270312 (-) True AMCG00015494
AMCG00015508 mRNA upstream 13219 10450229 ~ 10460735 (-) True AMCG00015508
AMCG00015514 mRNA upstream 56130 10493140 ~ 10505219 (-) True AMCG00015514
AMCG00015515 mRNA upstream 93043 10530053 ~ 10538036 (-) True AMCG00015515
AMCG00015518 mRNA upstream 197905 10634915 ~ 10636279 (-) True AMCG00015518
AMCG00015519 mRNA upstream 218175 10655185 ~ 10668046 (-) True AMCG00015519
TU122572 other downstream 90930 10325999 ~ 10340868 (-) False G98269
TU122510 other downstream 233144 10196618 ~ 10198654 (-) False AMCG00015493
TU122879 other upstream 577615 11014625 ~ 11245562 (-) True G98502
TU122882 other upstream 577615 11014625 ~ 11245562 (-) False G98502
TU122884 other upstream 586159 11023169 ~ 11237850 (-) False AMCG00015532
TU122907 other upstream 796305 11233315 ~ 11261168 (-) False AMCG00015535
TU122906 other upstream 820268 11257278 ~ 11261168 (-) False AMCG00015535

Expression Profile