RNA id: AMCG00015562


Basic Information

Item Value
RNA id AMCG00015562
length 294
RNA type mRNA
GC content 0.45
exon number 3
gene id AMCG00015562
representative True

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 12573463 ~ 12574052 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGAAGACTCAGAACCTGCTGGACTCAATCCTGTACCTGTGTGGAGTGTCGGGATCCACCTGgTGTATGTCAGCTTTATACAAGAATAAGGACTGGTCCTCTCaagtggaggagagagaggaagagatggTGGAAATGCTCACAACTGGGACAGTTTCAGTTTGGAAAAAGTGGAAGAGAATCTTCAAGGATGTGGATGACGAGAACTACTCTCTGACAGACCTCTGGACTGGCATTATTGTTTATCATATTGTGAAAGAGCTCATTAACGGCCTGTTGACAATGGTAAAGTAG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU123090 lncRNA downstream 49388 12523793 ~ 12524075 (-) True G98671
TU123081 lncRNA downstream 103023 12470098 ~ 12470440 (-) True G98662
TU123069 lncRNA downstream 115390 12457626 ~ 12458073 (-) True G98658
TU123068 lncRNA downstream 117257 12455930 ~ 12456206 (-) True G98657
TU123067 lncRNA downstream 118608 12454625 ~ 12454855 (-) True G98656
TU123294 lncRNA upstream 674784 13248836 ~ 13249283 (-) True G98836
TU123309 lncRNA upstream 686959 13261011 ~ 13262227 (-) True G98844
TU123476 lncRNA upstream 755840 13329892 ~ 13335929 (-) True G98953
TU123470 lncRNA upstream 822595 13396647 ~ 13416500 (-) True G98950
TU123501 lncRNA upstream 890806 13464858 ~ 13519520 (-) True G98973
AMCG00015560 mRNA downstream 66356 12481722 ~ 12507107 (-) True AMCG00015560
AMCG00015556 mRNA downstream 103475 12463056 ~ 12469988 (-) True AMCG00015556
AMCG00015557 mRNA downstream 142815 12405187 ~ 12430648 (-) False AMCG00015557
AMCG00015540 mRNA downstream 1227973 11334379 ~ 11345490 (-) False AMCG00015540
AMCG00015541 mRNA downstream 1250963 11271539 ~ 11322500 (-) True AMCG00015541
AMCG00015561 mRNA upstream 49206 12623258 ~ 12640668 (-) True AMCG00015561
AMCG00015568 mRNA upstream 189860 12763912 ~ 12779914 (-) True AMCG00015568
AMCG00015570 mRNA upstream 205886 12779938 ~ 12780493 (-) True AMCG00015570
AMCG00015569 mRNA upstream 206695 12780747 ~ 12780971 (-) True AMCG00015569
AMCG00015574 mRNA upstream 364613 12938665 ~ 12944741 (-) True AMCG00015574
TU122943 other downstream 1156801 11414367 ~ 11416662 (-) True G98546
TU122938 other downstream 1187264 11353783 ~ 11386199 (-) False G98543
TU122907 other downstream 1312295 11233315 ~ 11261168 (-) False AMCG00015535
TU122906 other downstream 1312295 11257278 ~ 11261168 (-) False AMCG00015535
TU122884 other downstream 1335613 11023169 ~ 11237850 (-) False AMCG00015532
TU123499 other upstream 884075 13458127 ~ 13459789 (-) False AMCG00015598
TU123543 other upstream 1097263 13671315 ~ 13739119 (-) True AMCG00015606
TU123617 other upstream 1267177 13841229 ~ 13864738 (-) False AMCG00015612
TU123618 other upstream 1267177 13841229 ~ 13864738 (-) True AMCG00015612
TU123619 other upstream 1267177 13841229 ~ 13864738 (-) False AMCG00015612

Expression Profile