RNA id: AMCG00015593


Basic Information

Item Value
RNA id AMCG00015593
length 258
RNA type mRNA
GC content 0.58
exon number 2
gene id AMCG00015593
representative True

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 13424469 ~ 13424876 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGGAGATCATGGATGATGACGTGCCCAGCCTCTTCTCCTACGGCTTCACTGACAGAGTGGGCAGCATCATGGTCAGCTGTGGGACGTGGGTTGGGTACCAGTACCCCGGTTACCGTGGCTACCAGTACCTCTTGGAGAAAGGGGACTACAGGCATTGGAATGAGTGGGGGGCACGCACCCCTCAGATCCAGTCCATGAGGCGCATTAGAGACATGCAGTGGCACCAGCACGGCTGCTACACCATGGCCagcaagtga

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU123470 lncRNA downstream 7969 13396647 ~ 13416500 (-) True G98950
TU123476 lncRNA downstream 88540 13329892 ~ 13335929 (-) True G98953
TU123309 lncRNA downstream 162242 13261011 ~ 13262227 (-) True G98844
TU123294 lncRNA downstream 175186 13248836 ~ 13249283 (-) True G98836
TU123090 lncRNA downstream 900394 12523793 ~ 12524075 (-) True G98671
TU123501 lncRNA upstream 39982 13464858 ~ 13519520 (-) True G98973
TU123527 lncRNA upstream 113651 13538527 ~ 13540957 (-) True G98993
TU123526 lncRNA upstream 114742 13539618 ~ 13539998 (-) True G98992
TU123574 lncRNA upstream 154849 13579725 ~ 13597723 (-) True G99002
TU123577 lncRNA upstream 154849 13579725 ~ 13816527 (-) False G99002
AMCG00015596 mRNA downstream 14761 13369403 ~ 13409708 (-) True AMCG00015596
AMCG00015594 mRNA downstream 59492 13361424 ~ 13364977 (-) True AMCG00015594
AMCG00015589 mRNA downstream 113248 13285470 ~ 13311221 (-) True AMCG00015589
AMCG00015586 mRNA downstream 230988 13181838 ~ 13193481 (-) True AMCG00015586
AMCG00015582 mRNA downstream 316015 13098638 ~ 13108454 (-) True AMCG00015582
AMCG00015595 mRNA upstream 1980 13426856 ~ 13432356 (-) True AMCG00015595
AMCG00015592 mRNA upstream 17715 13442591 ~ 13453776 (-) True AMCG00015592
AMCG00015598 mRNA upstream 33678 13458554 ~ 13468822 (-) True AMCG00015598
AMCG00015599 mRNA upstream 95788 13520664 ~ 13521014 (-) True AMCG00015599
AMCG00015603 mRNA upstream 181499 13606375 ~ 13624705 (-) True AMCG00015603
TU122943 other downstream 2007807 11414367 ~ 11416662 (-) True G98546
TU122938 other downstream 2038270 11353783 ~ 11386199 (-) False G98543
TU122907 other downstream 2163301 11233315 ~ 11261168 (-) False AMCG00015535
TU122906 other downstream 2163301 11257278 ~ 11261168 (-) False AMCG00015535
TU122884 other downstream 2186619 11023169 ~ 11237850 (-) False AMCG00015532
TU123499 other upstream 33251 13458127 ~ 13459789 (-) False AMCG00015598
TU123543 other upstream 246439 13671315 ~ 13739119 (-) True AMCG00015606
TU123617 other upstream 416353 13841229 ~ 13864738 (-) False AMCG00015612
TU123618 other upstream 416353 13841229 ~ 13864738 (-) True AMCG00015612
TU123619 other upstream 416353 13841229 ~ 13864738 (-) False AMCG00015612

Expression Profile