RNA id: AMCG00015595


Basic Information

Item Value
RNA id AMCG00015595
length 201
RNA type mRNA
GC content 0.52
exon number 3
gene id AMCG00015595
representative True

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 13426856 ~ 13432356 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGGTATACTATAGTACCATGCGACAAGACAGGGAAAGTGATACTTTTATATTGGGCTCTGTTGTGAAGTGGCTCCAGatGTACATCTTTGACCAGGAGAATTTCCAGGGCCGCTGTATGGAGTTCTCAGGGGAGTGTATGAACGTGTGCGACTGCGGCTTCGACCGTGTGCGCTCCGTCCGCATCGAGTGTGGCCCGTGA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU123470 lncRNA downstream 10356 13396647 ~ 13416500 (-) True G98950
TU123476 lncRNA downstream 90927 13329892 ~ 13335929 (-) True G98953
TU123309 lncRNA downstream 164629 13261011 ~ 13262227 (-) True G98844
TU123294 lncRNA downstream 177573 13248836 ~ 13249283 (-) True G98836
TU123090 lncRNA downstream 902781 12523793 ~ 12524075 (-) True G98671
TU123501 lncRNA upstream 32502 13464858 ~ 13519520 (-) True G98973
TU123527 lncRNA upstream 106171 13538527 ~ 13540957 (-) True G98993
TU123526 lncRNA upstream 107262 13539618 ~ 13539998 (-) True G98992
TU123574 lncRNA upstream 147369 13579725 ~ 13597723 (-) True G99002
TU123577 lncRNA upstream 147369 13579725 ~ 13816527 (-) False G99002
AMCG00015593 mRNA downstream 1980 13424469 ~ 13424876 (-) True AMCG00015593
AMCG00015596 mRNA downstream 17148 13369403 ~ 13409708 (-) True AMCG00015596
AMCG00015594 mRNA downstream 61879 13361424 ~ 13364977 (-) True AMCG00015594
AMCG00015589 mRNA downstream 115635 13285470 ~ 13311221 (-) True AMCG00015589
AMCG00015586 mRNA downstream 233375 13181838 ~ 13193481 (-) True AMCG00015586
AMCG00015592 mRNA upstream 10235 13442591 ~ 13453776 (-) True AMCG00015592
AMCG00015598 mRNA upstream 26198 13458554 ~ 13468822 (-) True AMCG00015598
AMCG00015599 mRNA upstream 88308 13520664 ~ 13521014 (-) True AMCG00015599
AMCG00015603 mRNA upstream 174019 13606375 ~ 13624705 (-) True AMCG00015603
AMCG00015601 mRNA upstream 231301 13663657 ~ 13665777 (-) True AMCG00015601
TU122943 other downstream 2010194 11414367 ~ 11416662 (-) True G98546
TU122938 other downstream 2040657 11353783 ~ 11386199 (-) False G98543
TU122907 other downstream 2165688 11233315 ~ 11261168 (-) False AMCG00015535
TU122906 other downstream 2165688 11257278 ~ 11261168 (-) False AMCG00015535
TU122884 other downstream 2189006 11023169 ~ 11237850 (-) False AMCG00015532
TU123499 other upstream 25771 13458127 ~ 13459789 (-) False AMCG00015598
TU123543 other upstream 238959 13671315 ~ 13739119 (-) True AMCG00015606
TU123617 other upstream 408873 13841229 ~ 13864738 (-) False AMCG00015612
TU123618 other upstream 408873 13841229 ~ 13864738 (-) True AMCG00015612
TU123619 other upstream 408873 13841229 ~ 13864738 (-) False AMCG00015612

Expression Profile