RNA id: TU122994


Basic Information

Item Value
RNA id TU122994
length 241
lncRNA type inter_gene
GC content 0.46
exon number 1
gene id G98591
representative True

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 11547635 ~ 11547875 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ttgtccccttagagggaagggttactgcaaatcattacaaagttattctgagtgatcacctttatcctatggtgacacatttctatcctgatgggagtggtctcttccaggatgacaatgcccccatccacagggcacgagggtcactgaatggtgtgatgagtatgaaaatgatgtgaatcatatgctatggccttcgcagtcaccagatctcaacccagttgaacacctatgggagatt

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU122939 lncRNA downstream 161436 11378013 ~ 11386199 (-) True G98543
TU122937 lncRNA downstream 189870 11353783 ~ 11357765 (-) False G98543
TU122914 lncRNA downstream 212788 11332663 ~ 11334847 (-) True AMCG00015540
TU122894 lncRNA downstream 397771 11143518 ~ 11149864 (-) True G98510
TU122857 lncRNA downstream 698377 10848289 ~ 10849258 (-) False AMCG00015524
TU123032 lncRNA upstream 851858 12399733 ~ 12405371 (-) True AMCG00015557
TU123059 lncRNA upstream 898123 12445998 ~ 12446953 (-) True G98648
TU123060 lncRNA upstream 899713 12447588 ~ 12447829 (-) True G98649
TU123061 lncRNA upstream 901421 12449296 ~ 12449821 (-) True G98650
TU123062 lncRNA upstream 904487 12452362 ~ 12452577 (-) True G98651
AMCG00015540 mRNA downstream 202145 11334379 ~ 11345490 (-) False AMCG00015540
AMCG00015541 mRNA downstream 225135 11271539 ~ 11322500 (-) True AMCG00015541
AMCG00015535 mRNA downstream 287040 11185860 ~ 11260595 (-) True AMCG00015535
AMCG00015536 mRNA downstream 363745 11179092 ~ 11183890 (-) True AMCG00015536
AMCG00015532 mRNA downstream 523022 11012650 ~ 11024613 (-) True AMCG00015532
AMCG00015557 mRNA upstream 857312 12405187 ~ 12430648 (-) False AMCG00015557
AMCG00015556 mRNA upstream 915181 12463056 ~ 12469988 (-) True AMCG00015556
AMCG00015560 mRNA upstream 933847 12481722 ~ 12507107 (-) True AMCG00015560
AMCG00015562 mRNA upstream 1025588 12573463 ~ 12574052 (-) True AMCG00015562
AMCG00015561 mRNA upstream 1075383 12623258 ~ 12640668 (-) True AMCG00015561
TU122943 other downstream 130973 11414367 ~ 11416662 (-) True G98546
TU122938 other downstream 161436 11353783 ~ 11386199 (-) False G98543
TU122907 other downstream 286467 11233315 ~ 11261168 (-) False AMCG00015535
TU122906 other downstream 286467 11257278 ~ 11261168 (-) False AMCG00015535
TU122879 other downstream 302073 11014625 ~ 11245562 (-) True G98502
TU123499 other upstream 1910252 13458127 ~ 13459789 (-) False AMCG00015598
TU123543 other upstream 2123440 13671315 ~ 13739119 (-) True AMCG00015606
TU123617 other upstream 2293354 13841229 ~ 13864738 (-) False AMCG00015612
TU123618 other upstream 2293354 13841229 ~ 13864738 (-) True AMCG00015612
TU123619 other upstream 2293354 13841229 ~ 13864738 (-) False AMCG00015612

Expression Profile