RNA id: TU124037


Basic Information

Item Value
RNA id TU124037
length 280
lncRNA type intronic
GC content 0.45
exon number 1
gene id G99332
representative True

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 14788919 ~ 14789198 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

cacagtACTATTTTCTTCTCAGGTCTCCTACTGTGACCTGACAGAACCCAACCTTTACTGCGCCCACTCTTCAGGGCGGGTCCCAACAATCCCAGCTCCTAATATCTTACACTTCACAATTTACAGATctaataaccaaaaaaaatgtGGCGCGTGGGCCAACCAAAGTTTTATACTAAATaactacaacacaaaacaccGGCTGGTCCACTGActacacagttaaaacaaaccaaaccgtCAGCTCAAAACAACTTCCTTGCTACCGGCCCAACACTCT

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU124033 lncRNA downstream 6652 14778430 ~ 14782267 (-) True AMCG00015647
TU123962 lncRNA downstream 164433 14549471 ~ 14624486 (-) True G99289
TU123963 lncRNA downstream 177864 14542961 ~ 14611055 (-) False G99289
TU123979 lncRNA downstream 184942 14538671 ~ 14603977 (-) True G99296
TU123988 lncRNA downstream 225693 14562178 ~ 14563226 (-) True G99302
TU124051 lncRNA upstream 51438 14840636 ~ 14840842 (-) True G99341
TU124053 lncRNA upstream 90562 14879760 ~ 14880075 (-) True G99343
TU124114 lncRNA upstream 91456 14880654 ~ 14881619 (-) True G99390
TU124121 lncRNA upstream 113503 14902701 ~ 14902927 (-) True G99395
TU124122 lncRNA upstream 116783 14905981 ~ 14907325 (-) True G99396
AMCG00015645 mRNA downstream 95638 14680794 ~ 14693281 (-) False AMCG00015645
AMCG00015644 mRNA downstream 112927 14672211 ~ 14675992 (-) True AMCG00015644
AMCG00015642 mRNA downstream 213104 14571978 ~ 14575815 (-) False AMCG00015642
AMCG00015641 mRNA downstream 268633 14517458 ~ 14520286 (-) True AMCG00015641
AMCG00015640 mRNA downstream 273640 14503504 ~ 14515279 (-) True AMCG00015640
AMCG00015649 mRNA upstream 132114 14921312 ~ 14928105 (-) True AMCG00015649
AMCG00015651 mRNA upstream 150848 14940046 ~ 14943540 (-) True AMCG00015651
AMCG00015652 mRNA upstream 160045 14949243 ~ 14955830 (-) True AMCG00015652
AMCG00015655 mRNA upstream 304922 15094120 ~ 15108025 (-) True AMCG00015655
AMCG00015659 mRNA upstream 381418 15170616 ~ 15200791 (-) True AMCG00015659
TU124012 other downstream 50645 14690387 ~ 14738274 (-) False AMCG00015645
TU124002 other downstream 93549 14690870 ~ 14695370 (-) True AMCG00015645
TU123993 other downstream 211286 14574366 ~ 14577633 (-) False AMCG00015642
TU123992 other downstream 215830 14570651 ~ 14573089 (-) True AMCG00015642
TU123958 other downstream 306011 14481194 ~ 14482908 (-) True G99286
TU124167 other upstream 313419 15102617 ~ 15189394 (-) True G99426
TU124175 other upstream 381417 15170615 ~ 15171672 (-) False AMCG00015659
TU124200 other upstream 470263 15259461 ~ 15260484 (-) True G99454
TU124288 other upstream 911880 15701078 ~ 15703290 (-) True AMCG00015666
TU124430 other upstream 1228385 16017583 ~ 16102456 (-) True G99605

Expression Profile