RNA id: AMCG00016354


Basic Information

Item Value
RNA id AMCG00016354
length 993
RNA type mRNA
GC content 0.52
exon number 1
gene id AMCG00016354
representative True

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 17145993 ~ 17146985 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGATGGCTGTCTCAAACAAGACCACGTTGAACCAGAGCAGCCCATACAAATGCCAATTAGATGAAAACTTCAAGTACATTCTCCTGCCAACCAGCTATGGACTTGTCTTCGTCATCGGCCTGGTGCTCAACATCATGGCCATGTATGTCATTGTCTTCCGCACAAAGCACTGGAAGCCGAGCACAATTTACATGTTCAACCTGACTGTCTCGGACACCCTGTACATCCTGACGCTGCCCTTCCTGGTGTATTACTACGCTGATGCCAGTGACTGGCCCTTCAGCGAACCCTTATGTAAAATCATCCGCTTCCTCTTCTACGCGAACCTCTACACCAGCATCCTCTTCCTGTCCTGTATCAGTATTCACCGCTTCCTGGGCGTCTGTTATCCCATGCAGTCACTGCAGTGGGTGAGCACGCTCAGGGCCCGACTGATCTCGGTGGGGGTGTGGGTCACCATCATGTCCTTCCAGTCGCCCATCTTGTATTTCTCCCGCACCACAACGTCGGGCCAGAAGGTTTGCTACGACACCACCAGCATTGAGCTCTTCAATGACTTCCTGGTGTACAGCTCCATCATCTCCGTGGTGCTGTTCTGCATCCCTTTCATGGTGGTTGTGGTTTGCTACTGCCTGATGGTGAAGAAGCTGTTGGAGCCCAGTGCGGGGGGGGCCTCCTCTTTGAAGTCCAAGCAGAAGTCCATCAAGATGATCATCATTGTCCTGGGCGCAttcatgatctgcttcctgcccTTCCACCTCACTCGGACACTCTACTACATGTTCAGGTACATGGATGTCAGCTGTACCGCTCTGCAAGGTGCCAGCATTGCTTACAAGGTCACAAAGCCCCTTGCCAGTGCCAACAGCTGCCTGGACCCCATTTTGTACTTCCTGGCAGGGCAGAGCTTTCGCAAGAATTTCACCACcaggaaaaggaaaagctgCTCTCCGAATGTAATCTGTGAAAAGACATCTTCAACTCAACTGTGA

Function

GO: NA

KEGG:

id description
K04269 P2RY2; P2Y purinoceptor 2

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU16072 lncRNA downstream 221321 16918566 ~ 16924672 (-) True G12978
TU16051 lncRNA downstream 277666 16866319 ~ 16868327 (-) False AMCG00016345
TU15992 lncRNA downstream 354324 16791423 ~ 16791669 (-) True G12921
TU15986 lncRNA downstream 396074 16749719 ~ 16749919 (-) True G12915
TU15973 lncRNA downstream 522087 16623683 ~ 16623906 (-) True G12902
TU16151 lncRNA upstream 94959 17241944 ~ 17246330 (-) True G13045
TU16154 lncRNA upstream 94959 17241944 ~ 17246330 (-) False G13045
TU16156 lncRNA upstream 94959 17241944 ~ 17246330 (-) False G13045
TU16168 lncRNA upstream 116616 17263601 ~ 17266135 (-) False AMCG00016360
TU16181 lncRNA upstream 137418 17284403 ~ 17286829 (-) True G13065
AMCG00016352 mRNA downstream 22754 17122706 ~ 17123239 (-) True AMCG00016352
AMCG00016353 mRNA downstream 28258 17103974 ~ 17117735 (-) True AMCG00016353
AMCG00016351 mRNA downstream 74546 17040305 ~ 17071447 (-) True AMCG00016351
AMCG00016350 mRNA downstream 122899 17009731 ~ 17023094 (-) True AMCG00016350
AMCG00016348 mRNA downstream 207433 16929428 ~ 16938560 (-) True AMCG00016348
AMCG00016360 mRNA upstream 116635 17263620 ~ 17266747 (-) True AMCG00016360
AMCG00016361 mRNA upstream 146103 17293088 ~ 17294875 (-) True AMCG00016361
AMCG00016368 mRNA upstream 233446 17380431 ~ 17413600 (-) True AMCG00016368
AMCG00016367 mRNA upstream 280519 17427504 ~ 17460486 (-) True AMCG00016367
AMCG00016369 mRNA upstream 319698 17466683 ~ 17472931 (-) True AMCG00016369
TU16024 other downstream 284814 16858541 ~ 16861179 (-) True G12945
TU16025 other downstream 284814 16858541 ~ 16861179 (-) False G12945
TU16027 other downstream 284814 16858541 ~ 16861179 (-) False G12945
TU15638 other downstream 2354024 14790203 ~ 14791969 (-) False AMCG00016293
TU15220 other downstream 3586809 13554585 ~ 13559184 (-) False AMCG00016246
TU16556 other upstream 1944254 19091239 ~ 19105381 (-) True G13367
TU16905 other upstream 2988212 20135197 ~ 20135547 (-) False AMCG00016453
TU17287 other upstream 6308107 23455092 ~ 23455811 (-) True G13962
TU17295 other upstream 6552164 23699149 ~ 23700255 (-) True G13969
TU17551 other upstream 7164052 24311037 ~ 24316802 (-) False AMCG00016531

Expression Profile