RNA id: AMCG00016361


Basic Information

Item Value
RNA id AMCG00016361
length 651
RNA type mRNA
GC content 0.65
exon number 2
gene id AMCG00016361
representative True

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 17293088 ~ 17294875 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGGCGGAGCTGGGCGCGTCgctggggctgctgctgctggtcgTGCTGCTCAGCGAGCTGGCGCGGAGGACGGCGAGGAGGCTGCTGGCGGAGAAGCGGGGCTATGCCGTCTACGCGCTGGAGACCATCTCGACCTTGCAGCTGTGCTTCTGCACCCATGAGCTCAAGCTGCTGGGCGAGGTGGCCAGGGTCGAGCCGCAGATAGGGCTGACCCTGACCTACCTCATCACGGTGGTGCACGTCTTGACTTTCCGCGGGGCGATCTGCAACCCCTCcggcgctctggagcaggtttacCGGCGGACCCTGAGCAGGACGGGCGCCGCGGCGAGGATTGGCTGTCAGTTTCTGGCAGCTGTGTTGGCACGGTTGTTGGTGCCGCACATCTGGGCACTAGGGCTCTCGGATTTGCACCTCCGGCATAAACTGCTGGGGTTTCAGTGCATCAGCCCGATCCACGCCACCCTGGCCCAGGCTGCGGCGGTGGAGCTGTGCTGCGCCTTCGCCGTGCAGTCCGCCGTGTCCCACCTGCACAGGGTGGGCGAGAAGTACCGGGTCCACCTGATAGCCGCCGTCATCACAACGCTGTTCGCCTGCAGTGGTAACACCTTCATGGAGTATTCGTTTGTCTACTGGCTGGGCCCAGTATTG

Function

GO: NA

KEGG:

id description
K09870 AQP11; aquaporin-11

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU16181 lncRNA downstream 6259 17284403 ~ 17286829 (-) True G13065
TU16168 lncRNA downstream 26953 17263601 ~ 17266135 (-) False AMCG00016360
TU16151 lncRNA downstream 46758 17241944 ~ 17246330 (-) True G13045
TU16154 lncRNA downstream 46758 17241944 ~ 17246330 (-) False G13045
TU16156 lncRNA downstream 46758 17241944 ~ 17246330 (-) False G13045
TU16213 lncRNA upstream 80391 17375266 ~ 17377539 (-) True G13091
TU16261 lncRNA upstream 198980 17493855 ~ 17494346 (-) True G13126
TU16264 lncRNA upstream 201048 17495923 ~ 17496347 (-) True G13129
TU16302 lncRNA upstream 243159 17538034 ~ 17540345 (-) False AMCG00016376
TU16425 lncRNA upstream 867912 18162787 ~ 18165770 (-) True G13254
AMCG00016360 mRNA downstream 26341 17263620 ~ 17266747 (-) True AMCG00016360
AMCG00016354 mRNA downstream 146103 17145993 ~ 17146985 (-) True AMCG00016354
AMCG00016352 mRNA downstream 169849 17122706 ~ 17123239 (-) True AMCG00016352
AMCG00016353 mRNA downstream 175353 17103974 ~ 17117735 (-) True AMCG00016353
AMCG00016351 mRNA downstream 221641 17040305 ~ 17071447 (-) True AMCG00016351
AMCG00016368 mRNA upstream 85556 17380431 ~ 17413600 (-) True AMCG00016368
AMCG00016367 mRNA upstream 132629 17427504 ~ 17460486 (-) True AMCG00016367
AMCG00016369 mRNA upstream 171808 17466683 ~ 17472931 (-) True AMCG00016369
AMCG00016375 mRNA upstream 180543 17475418 ~ 17490419 (-) True AMCG00016375
AMCG00016374 mRNA upstream 209005 17503880 ~ 17506443 (-) True AMCG00016374
TU16024 other downstream 431909 16858541 ~ 16861179 (-) True G12945
TU16025 other downstream 431909 16858541 ~ 16861179 (-) False G12945
TU16027 other downstream 431909 16858541 ~ 16861179 (-) False G12945
TU15638 other downstream 2501119 14790203 ~ 14791969 (-) False AMCG00016293
TU15220 other downstream 3733904 13554585 ~ 13559184 (-) False AMCG00016246
TU16556 other upstream 1796364 19091239 ~ 19105381 (-) True G13367
TU16905 other upstream 2840322 20135197 ~ 20135547 (-) False AMCG00016453
TU17287 other upstream 6160217 23455092 ~ 23455811 (-) True G13962
TU17295 other upstream 6404274 23699149 ~ 23700255 (-) True G13969
TU17551 other upstream 7016162 24311037 ~ 24316802 (-) False AMCG00016531

Expression Profile