Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00016914 |
| length | 810 |
| RNA type | mRNA |
| GC content | 0.56 |
| exon number | 3 |
| gene id | AMCG00016914 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030122.1 |
| NCBI id | CM030122.1 |
| chromosome length | 54868152 |
| location | 34294213 ~ 34296833 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0030903 | notochord development | biological_process |
| id | description |
|---|---|
| K19387 | PTRF; polymerase I and transcript release factor |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU20560 | lncRNA | upstream | 188526 | 34104456 ~ 34105687 (+) | True | G16552 |
| TU20553 | lncRNA | upstream | 194617 | 34093276 ~ 34099596 (+) | True | AMCG00016909 |
| TU20554 | lncRNA | upstream | 195821 | 34093276 ~ 34098392 (+) | False | AMCG00016909 |
| TU20546 | lncRNA | upstream | 298831 | 33993182 ~ 33995382 (+) | True | G16542 |
| TU20509 | lncRNA | upstream | 642924 | 33651081 ~ 33651289 (+) | True | G16512 |
| TU20676 | lncRNA | downstream | 300989 | 34597822 ~ 34599917 (+) | True | G16646 |
| TU20699 | lncRNA | downstream | 439504 | 34736337 ~ 34736549 (+) | True | G16668 |
| TU20725 | lncRNA | downstream | 478992 | 34775825 ~ 34777047 (+) | True | G16692 |
| TU20731 | lncRNA | downstream | 524364 | 34821197 ~ 34821413 (+) | True | G16698 |
| TU20745 | lncRNA | downstream | 794626 | 35091459 ~ 35094092 (+) | True | G16705 |
| AMCG00016913 | mRNA | upstream | 22795 | 34268998 ~ 34271418 (+) | True | AMCG00016913 |
| AMCG00016910 | mRNA | upstream | 102464 | 34169488 ~ 34191749 (+) | True | AMCG00016910 |
| AMCG00016909 | mRNA | upstream | 194633 | 34093302 ~ 34099580 (+) | False | AMCG00016909 |
| AMCG00016905 | mRNA | upstream | 492403 | 33791287 ~ 33801810 (+) | True | AMCG00016905 |
| AMCG00016906 | mRNA | upstream | 520680 | 33761418 ~ 33773533 (+) | True | AMCG00016906 |
| AMCG00016912 | mRNA | downstream | 14035 | 34310868 ~ 34340346 (+) | True | AMCG00016912 |
| AMCG00016916 | mRNA | downstream | 63394 | 34360227 ~ 34435938 (+) | True | AMCG00016916 |
| AMCG00016915 | mRNA | downstream | 147568 | 34444401 ~ 34472634 (+) | True | AMCG00016915 |
| AMCG00016917 | mRNA | downstream | 184300 | 34481133 ~ 34499652 (+) | True | AMCG00016917 |
| AMCG00016918 | mRNA | downstream | 261706 | 34558539 ~ 34597579 (+) | True | AMCG00016918 |
| TU20555 | other | upstream | 193350 | 34100315 ~ 34100863 (+) | True | G16550 |
| TU20550 | other | upstream | 246493 | 34047371 ~ 34047720 (+) | True | G16546 |
| TU20517 | other | upstream | 621593 | 33668629 ~ 33672620 (+) | True | AMCG00016901 |
| TU20240 | other | upstream | 1436773 | 32856361 ~ 32857440 (+) | True | G16289 |
| TU20165 | other | upstream | 1790957 | 32500796 ~ 32503256 (+) | False | AMCG00016854 |
| TU21320 | other | downstream | 4199218 | 38496051 ~ 38503632 (+) | True | G17193 |
| TU21955 | other | downstream | 8094464 | 42391297 ~ 42397787 (+) | True | G17697 |
| TU22431 | other | downstream | 9829381 | 44126214 ~ 44131602 (+) | False | AMCG00017078 |
| TU22550 | other | downstream | 10357819 | 44654652 ~ 44656098 (+) | True | G18192 |
| TU23388 | other | downstream | 15105886 | 49402719 ~ 49403634 (+) | False | AMCG00017173 |
