Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00016919 |
| length | 546 |
| RNA type | mRNA |
| GC content | 0.58 |
| exon number | 2 |
| gene id | AMCG00016919 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030122.1 |
| NCBI id | CM030122.1 |
| chromosome length | 54868152 |
| location | 34611643 ~ 34614856 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0050896 | response to stimulus | biological_process |
| id | description |
|---|---|
| K05246 | HCRT; hypocretin (orexin) neuropeptide |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU20676 | lncRNA | upstream | 11726 | 34597822 ~ 34599917 (+) | True | G16646 |
| TU20560 | lncRNA | upstream | 505956 | 34104456 ~ 34105687 (+) | True | G16552 |
| TU20553 | lncRNA | upstream | 512047 | 34093276 ~ 34099596 (+) | True | AMCG00016909 |
| TU20554 | lncRNA | upstream | 513251 | 34093276 ~ 34098392 (+) | False | AMCG00016909 |
| TU20546 | lncRNA | upstream | 616261 | 33993182 ~ 33995382 (+) | True | G16542 |
| TU20699 | lncRNA | downstream | 121481 | 34736337 ~ 34736549 (+) | True | G16668 |
| TU20725 | lncRNA | downstream | 160969 | 34775825 ~ 34777047 (+) | True | G16692 |
| TU20731 | lncRNA | downstream | 206341 | 34821197 ~ 34821413 (+) | True | G16698 |
| TU20745 | lncRNA | downstream | 476603 | 35091459 ~ 35094092 (+) | True | G16705 |
| TU20782 | lncRNA | downstream | 569479 | 35184335 ~ 35234875 (+) | True | G16728 |
| AMCG00016918 | mRNA | upstream | 14064 | 34558539 ~ 34597579 (+) | True | AMCG00016918 |
| AMCG00016917 | mRNA | upstream | 111991 | 34481133 ~ 34499652 (+) | True | AMCG00016917 |
| AMCG00016915 | mRNA | upstream | 139009 | 34444401 ~ 34472634 (+) | True | AMCG00016915 |
| AMCG00016916 | mRNA | upstream | 175705 | 34360227 ~ 34435938 (+) | True | AMCG00016916 |
| AMCG00016912 | mRNA | upstream | 271297 | 34310868 ~ 34340346 (+) | True | AMCG00016912 |
| AMCG00016921 | mRNA | downstream | 42855 | 34657711 ~ 34660464 (+) | True | AMCG00016921 |
| AMCG00016920 | mRNA | downstream | 64656 | 34679512 ~ 34698405 (+) | True | AMCG00016920 |
| AMCG00016924 | mRNA | downstream | 93441 | 34708297 ~ 34727383 (+) | True | AMCG00016924 |
| AMCG00016922 | mRNA | downstream | 112549 | 34727405 ~ 34757001 (+) | True | AMCG00016922 |
| AMCG00016923 | mRNA | downstream | 146636 | 34761492 ~ 34773639 (+) | True | AMCG00016923 |
| TU20555 | other | upstream | 510780 | 34100315 ~ 34100863 (+) | True | G16550 |
| TU20550 | other | upstream | 563923 | 34047371 ~ 34047720 (+) | True | G16546 |
| TU20517 | other | upstream | 939023 | 33668629 ~ 33672620 (+) | True | AMCG00016901 |
| TU20240 | other | upstream | 1754203 | 32856361 ~ 32857440 (+) | True | G16289 |
| TU20165 | other | upstream | 2108387 | 32500796 ~ 32503256 (+) | False | AMCG00016854 |
| TU21320 | other | downstream | 3881195 | 38496051 ~ 38503632 (+) | True | G17193 |
| TU21955 | other | downstream | 7776441 | 42391297 ~ 42397787 (+) | True | G17697 |
| TU22431 | other | downstream | 9511358 | 44126214 ~ 44131602 (+) | False | AMCG00017078 |
| TU22550 | other | downstream | 10039796 | 44654652 ~ 44656098 (+) | True | G18192 |
| TU23388 | other | downstream | 14787863 | 49402719 ~ 49403634 (+) | False | AMCG00017173 |
