Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00017231 |
| length | 213 |
| RNA type | mRNA |
| GC content | 0.55 |
| exon number | 1 |
| gene id | AMCG00017231 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030122.1 |
| NCBI id | CM030122.1 |
| chromosome length | 54868152 |
| location | 51212179 ~ 51212391 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0006355 | regulation of transcription, DNA-templated | biological_process |
| GO:0005634 | nucleus | cellular_component |
| GO:0003700 | DNA-binding transcription factor activity | molecular_function |
| GO:0000976 | transcription regulatory region sequence-specific DNA binding | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU23870 | lncRNA | upstream | 73344 | 51137293 ~ 51138835 (+) | True | G19245 |
| TU23810 | lncRNA | upstream | 484028 | 50727740 ~ 50728151 (+) | True | G19195 |
| TU23759 | lncRNA | upstream | 571377 | 50640587 ~ 50640802 (+) | True | G19152 |
| TU23752 | lncRNA | upstream | 580545 | 50631378 ~ 50631634 (+) | True | G19146 |
| TU23711 | lncRNA | upstream | 648901 | 50559450 ~ 50563278 (+) | True | G19114 |
| TU23904 | lncRNA | downstream | 83441 | 51295832 ~ 51296718 (+) | True | G19275 |
| TU23921 | lncRNA | downstream | 127522 | 51339913 ~ 51340117 (+) | True | G19292 |
| TU24023 | lncRNA | downstream | 352898 | 51565289 ~ 51571994 (+) | True | G19366 |
| TU24151 | lncRNA | downstream | 894557 | 52106948 ~ 52116341 (+) | True | G19465 |
| TU24211 | lncRNA | downstream | 1335358 | 52547749 ~ 52548031 (+) | True | G19515 |
| AMCG00017229 | mRNA | upstream | 35720 | 51169613 ~ 51176459 (+) | True | AMCG00017229 |
| AMCG00017226 | mRNA | upstream | 46931 | 51159919 ~ 51165248 (+) | True | AMCG00017226 |
| AMCG00017227 | mRNA | upstream | 143854 | 51048621 ~ 51068325 (+) | True | AMCG00017227 |
| AMCG00017224 | mRNA | upstream | 222326 | 50985259 ~ 50989853 (+) | True | AMCG00017224 |
| AMCG00017225 | mRNA | upstream | 239578 | 50960833 ~ 50972601 (+) | True | AMCG00017225 |
| AMCG00017230 | mRNA | downstream | 1868 | 51214259 ~ 51214516 (+) | True | AMCG00017230 |
| AMCG00017243 | mRNA | downstream | 427246 | 51639637 ~ 51640615 (+) | True | AMCG00017243 |
| AMCG00017238 | mRNA | downstream | 435013 | 51647404 ~ 51649518 (+) | True | AMCG00017238 |
| AMCG00017237 | mRNA | downstream | 441139 | 51653530 ~ 51663841 (+) | True | AMCG00017237 |
| AMCG00017246 | mRNA | downstream | 511308 | 51723699 ~ 51725528 (+) | True | AMCG00017246 |
| TU23712 | other | upstream | 650391 | 50559450 ~ 50561788 (+) | False | G19114 |
| TU23710 | other | upstream | 659194 | 50551880 ~ 50552985 (+) | True | G19113 |
| TU23515 | other | upstream | 1490708 | 49713524 ~ 49721471 (+) | False | AMCG00017183 |
| TU23388 | other | upstream | 1808545 | 49402719 ~ 49403634 (+) | False | AMCG00017173 |
| TU22550 | other | upstream | 6556081 | 44654652 ~ 44656098 (+) | True | G18192 |
| TU24289 | other | downstream | 1601862 | 52814253 ~ 52817098 (+) | False | AMCG00017280 |
| TU24309 | other | downstream | 1608670 | 52821061 ~ 52834042 (+) | True | AMCG00017287 |
| TU24421 | other | downstream | 2123518 | 53335909 ~ 53339655 (+) | True | G19683 |
| TU24512 | other | downstream | 2291041 | 53503432 ~ 53536464 (+) | True | G19754 |
| TU24604 | other | downstream | 2578156 | 53790547 ~ 53792694 (+) | True | G19829 |
