RNA id: AMCG00017326



Basic Information


Item Value
RNA id AMCG00017326
length 342
RNA type mRNA
GC content 0.70
exon number 2
gene id AMCG00017326
representative True

Chromosome Information


Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 53830871 ~ 53834907 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


TACTGCGAGACAGAGATCAACCTGTGCTACTCCAGCCCATGCCTGAACGAGGGCGTGTGCGCACGCCGGGAAGGCGGCTTCACCTGCATCTGCAGAGAGGACTACaccggTGAGCGCTGCGAGGTGGACCGGCGCCGGGGCCGCTGCGCTCCGGGGGTATGCGGTAACGGGGGCACGTGCCGGGACCTGGCCGGGGGGGGGTTCCGCTGCGACTGCCCGGCAGGCGGGGGCGGCTTCGAGAGGCCCTACTGCGCTGTGGCCGCCCGCTACTTCCCCCCCAAGACCTTCGTGATGTTCCGCGGCCTGCGCCAGCGCTTCcacctgtccctctccctctcgtgA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU24615 lncRNA upstream 14795 53815845 ~ 53816076 (+) True G19838
TU24613 lncRNA upstream 16884 53813785 ~ 53813987 (+) True G19836
TU24558 lncRNA upstream 157057 53671984 ~ 53673814 (+) True G19789
TU24506 lncRNA upstream 296997 53526749 ~ 53533874 (+) False G19751
TU24679 lncRNA downstream 77911 53912818 ~ 53914877 (+) True G19889
TU24680 lncRNA downstream 80218 53915125 ~ 53924054 (+) False AMCG00017331
TU24691 lncRNA downstream 113851 53948758 ~ 54041033 (+) True G19899
TU24693 lncRNA downstream 113851 53948758 ~ 53949029 (+) False G19899
TU24674 lncRNA downstream 124556 53959463 ~ 53961838 (+) True G19887
AMCG00017330 mRNA upstream 9398 53817272 ~ 53821473 (+) True AMCG00017330
AMCG00017325 mRNA upstream 25075 53794794 ~ 53805796 (+) True AMCG00017325
AMCG00017323 mRNA upstream 95896 53722534 ~ 53734975 (+) True AMCG00017323
AMCG00017319 mRNA upstream 140965 53674878 ~ 53689906 (+) True AMCG00017319
AMCG00017314 mRNA upstream 161099 53659498 ~ 53669772 (+) True AMCG00017314
AMCG00017324 mRNA downstream 41679 53876586 ~ 53883504 (+) True AMCG00017324
AMCG00017331 mRNA downstream 80247 53915154 ~ 53936482 (+) True AMCG00017331
AMCG00017335 mRNA downstream 178654 54013561 ~ 54033037 (+) True AMCG00017335
AMCG00017336 mRNA downstream 201607 54036514 ~ 54056665 (+) True AMCG00017336
AMCG00017340 mRNA downstream 318700 54153607 ~ 54170510 (+) True AMCG00017340
TU24611 other upstream 30570 53794626 ~ 53800301 (+) False AMCG00017325
TU24604 other upstream 38177 53790547 ~ 53792694 (+) True G19829
TU24512 other upstream 294407 53503432 ~ 53536464 (+) True G19754
TU24421 other upstream 491216 53335909 ~ 53339655 (+) True G19683
TU24309 other upstream 996829 52821061 ~ 52834042 (+) True AMCG00017287
TU24632 other downstream 19000 53853907 ~ 53855839 (+) True G19854
TU24638 other downstream 29201 53864108 ~ 53864718 (+) True G19860
TU24688 other downstream 104630 53939537 ~ 53947618 (+) True G19896
TU24769 other downstream 219893 54054800 ~ 54055175 (+) True G19956
TU24774 other downstream 229451 54064358 ~ 54066187 (+) True G19961

Expression Profile