RNA id: TU14598


Basic Information

Item Value
RNA id TU14598
length 232
lncRNA type inter_gene
GC content 0.47
exon number 1
gene id G11814
representative True

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 11483562 ~ 11483793 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

gattcactggcttacgaccctttttctggacctggaccattctccctcttgaaccccggactgtctgacaacctccaatggtaacgaactttgattacggactgtgactacgaacctgccttgcccctgttatgcttctgtctgcccggtgttcggctctaccgacccgggcatttactgttattattattgtttgttttatagttagggattgtttacgtttagttagtgc

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU14589 lncRNA downstream 83144 11400207 ~ 11400418 (-) True G11807
TU14587 lncRNA downstream 95437 11387731 ~ 11388125 (-) True G11805
TU14583 lncRNA downstream 142113 11340870 ~ 11341449 (-) True G11801
TU14537 lncRNA downstream 505168 10978183 ~ 10978394 (-) True G11759
TU14532 lncRNA downstream 539788 10943526 ~ 10943774 (-) True G11754
TU14652 lncRNA upstream 217798 11701591 ~ 11717417 (-) False G11858
TU14651 lncRNA upstream 227491 11711284 ~ 11717417 (-) True G11858
TU14659 lncRNA upstream 254552 11738345 ~ 11738599 (-) True G11865
TU14679 lncRNA upstream 282359 11766152 ~ 11766577 (-) False AMCG00016194
TU14772 lncRNA upstream 348635 11832428 ~ 11947322 (-) False AMCG00016203
AMCG00016183 mRNA downstream 7770 11471726 ~ 11475792 (-) True AMCG00016183
AMCG00016185 mRNA downstream 38252 11444355 ~ 11445310 (-) True AMCG00016185
AMCG00016179 mRNA downstream 246046 11224456 ~ 11237516 (-) True AMCG00016179
AMCG00016177 mRNA downstream 356824 11034266 ~ 11126738 (-) True AMCG00016177
AMCG00016178 mRNA downstream 449299 11001740 ~ 11034263 (-) True AMCG00016178
AMCG00016189 mRNA upstream 100021 11583814 ~ 11591097 (-) True AMCG00016189
AMCG00016188 mRNA upstream 121024 11604817 ~ 11623059 (-) True AMCG00016188
AMCG00016187 mRNA upstream 163938 11647731 ~ 11662835 (-) True AMCG00016187
AMCG00016195 mRNA upstream 235622 11719415 ~ 11729797 (-) True AMCG00016195
AMCG00016194 mRNA upstream 282649 11766442 ~ 11781547 (-) True AMCG00016194
TU14520 other downstream 635751 10846834 ~ 10847811 (-) True AMCG00016176
TU14519 other downstream 635751 10846931 ~ 10847811 (-) False AMCG00016176
TU14024 other downstream 3289130 8191546 ~ 8194432 (-) False G11326
TU13237 other downstream 7563138 3907759 ~ 3920424 (-) False AMCG00016049
TU13149 other downstream 7944369 3529252 ~ 3539193 (-) False AMCG00016046
TU14856 other upstream 839368 12323161 ~ 12329033 (-) True AMCG00016211
TU15028 other upstream 1378306 12862099 ~ 12870560 (-) False AMCG00016226
TU15029 other upstream 1378306 12862099 ~ 12862870 (-) False AMCG00016226
TU15027 other upstream 1386047 12869840 ~ 12870560 (-) False AMCG00016226
TU15220 other upstream 2070792 13554585 ~ 13559184 (-) False AMCG00016246

Expression Profile