RNA id: TU14937


Basic Information

Item Value
RNA id TU14937
length 206
lncRNA type inter_gene
GC content 0.43
exon number 1
gene id G12096
representative True

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 12638493 ~ 12638698 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

GGTGAGCGCAGGGATCAATGTGATTAAAGCAGCAGTGGGAAGATGTGTTTGCGTGCTGCCTGCTGGATGGAGAGAGGTGGTGAAGAGGGTCTGAGTTTGGAGTCTAATCATTACTACTGCTGCTTCACATCATCGGGGCTGGGCTGCTTTGGCCACTAAATTCATTTCGGTTTGGATTAGTTGCAACCGTTTatggtttctttttt

Function

GO:

id name namespace
GO:0005509 calcium ion binding molecular_function

KEGG:

id description
ko04974 Protein digestion and absorption

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU14892 lncRNA downstream 247085 12387798 ~ 12391408 (-) True G12058
TU14871 lncRNA downstream 283129 12354675 ~ 12355364 (-) True G12046
TU14864 lncRNA downstream 285112 12353160 ~ 12353381 (-) True G12041
TU14816 lncRNA downstream 399479 12238785 ~ 12239014 (-) True G11996
TU14772 lncRNA downstream 691171 11832428 ~ 11947322 (-) False AMCG00016203
TU15107 lncRNA upstream 459293 13097991 ~ 13100224 (-) True G12235
TU15219 lncRNA upstream 904650 13543348 ~ 13545718 (-) False AMCG00016246
TU15249 lncRNA upstream 988557 13627255 ~ 13639150 (-) True G12359
TU15247 lncRNA upstream 999605 13638303 ~ 13639590 (-) False G12358
TU15248 lncRNA upstream 999605 13638303 ~ 13639590 (-) False G12358
AMCG00016219 mRNA downstream 31292 12602884 ~ 12607201 (-) True AMCG00016219
AMCG00016216 mRNA downstream 107448 12514358 ~ 12531045 (-) True AMCG00016216
AMCG00016217 mRNA downstream 139492 12473263 ~ 12499001 (-) True AMCG00016217
AMCG00016212 mRNA downstream 261965 12360575 ~ 12376528 (-) True AMCG00016212
AMCG00016211 mRNA downstream 310051 12324822 ~ 12328442 (-) False AMCG00016211
AMCG00016227 mRNA upstream 89416 12728114 ~ 12734030 (-) True AMCG00016227
AMCG00016223 mRNA upstream 100053 12738751 ~ 12743780 (-) True AMCG00016223
AMCG00016224 mRNA upstream 109231 12747929 ~ 12777926 (-) True AMCG00016224
AMCG00016228 mRNA upstream 147560 12786258 ~ 12792197 (-) True AMCG00016228
AMCG00016225 mRNA upstream 155110 12793808 ~ 12805884 (-) True AMCG00016225
TU14856 other downstream 309460 12323161 ~ 12329033 (-) True AMCG00016211
TU14520 other downstream 1790682 10846834 ~ 10847811 (-) True AMCG00016176
TU14519 other downstream 1790682 10846931 ~ 10847811 (-) False AMCG00016176
TU14024 other downstream 4444061 8191546 ~ 8194432 (-) False G11326
TU13237 other downstream 8718069 3907759 ~ 3920424 (-) False AMCG00016049
TU15028 other upstream 223401 12862099 ~ 12870560 (-) False AMCG00016226
TU15029 other upstream 223401 12862099 ~ 12862870 (-) False AMCG00016226
TU15027 other upstream 231142 12869840 ~ 12870560 (-) False AMCG00016226
TU15220 other upstream 915887 13554585 ~ 13559184 (-) False AMCG00016246
TU15638 other upstream 2151505 14790203 ~ 14791969 (-) False AMCG00016293

Expression Profile