RNA id: TU17114


Basic Information

Item Value
RNA id TU17114
length 206
lncRNA type inter_gene
GC content 0.50
exon number 2
gene id G13812
representative True

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 20761423 ~ 20761693 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

gtgcagaaaaatggcagcaggtgctctggactgatgagtcaaaatttgaaatatctggcaacagtgaagcatggtggaggttccttgcaagtttggggctgcatttctgcaaatggagttggggatttggtcagaatgaatggtctcctcaatgctgagaagtacatgcagatacttatccatcatgcaataccatcagggaggca

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU17110 lncRNA downstream 94443 20666142 ~ 20666980 (-) False AMCG00016480
TU17108 lncRNA downstream 109155 20646836 ~ 20652268 (-) True G13806
TU17099 lncRNA downstream 124485 20630472 ~ 20636938 (-) False AMCG00016479
TU17088 lncRNA downstream 162658 20595329 ~ 20598765 (-) True G13789
TU17050 lncRNA downstream 248019 20468246 ~ 20513404 (-) True G13762
TU17121 lncRNA upstream 146225 20907918 ~ 20908118 (-) True G13819
TU17178 lncRNA upstream 1020371 21782064 ~ 21782296 (-) True G13860
TU17179 lncRNA upstream 1023551 21785244 ~ 21785716 (-) True G13861
TU17202 lncRNA upstream 1380260 22141953 ~ 22142185 (-) True G13884
TU17205 lncRNA upstream 1410857 22172550 ~ 22172940 (-) True G13887
AMCG00016480 mRNA downstream 78399 20666750 ~ 20683024 (-) True AMCG00016480
AMCG00016479 mRNA downstream 124463 20616509 ~ 20636960 (-) True AMCG00016479
AMCG00016476 mRNA downstream 237666 20517799 ~ 20523757 (-) True AMCG00016476
AMCG00016477 mRNA downstream 250955 20506848 ~ 20510468 (-) True AMCG00016477
AMCG00016471 mRNA downstream 314392 20441545 ~ 20447031 (-) True AMCG00016471
AMCG00016481 mRNA upstream 162287 20923980 ~ 20973210 (-) True AMCG00016481
AMCG00016483 mRNA upstream 225299 20986992 ~ 21012361 (-) True AMCG00016483
AMCG00016484 mRNA upstream 312401 21074094 ~ 21245418 (-) True AMCG00016484
AMCG00016485 mRNA upstream 927118 21688811 ~ 21709689 (-) True AMCG00016485
AMCG00016486 mRNA upstream 1149177 21910870 ~ 21921639 (-) True AMCG00016486
TU16905 other downstream 625876 20135197 ~ 20135547 (-) False AMCG00016453
TU16556 other downstream 1656042 19091239 ~ 19105381 (-) True G13367
TU16024 other downstream 3900244 16858541 ~ 16861179 (-) True G12945
TU17287 other upstream 2693399 23455092 ~ 23455811 (-) True G13962
TU17295 other upstream 2937456 23699149 ~ 23700255 (-) True G13969
TU17551 other upstream 3549344 24311037 ~ 24316802 (-) False AMCG00016531
TU17553 other upstream 3549344 24311037 ~ 24316802 (-) False AMCG00016531
TU17725 other upstream 4119455 24881148 ~ 24882098 (-) True G14305

Expression Profile