RNA id: TU18432


Basic Information

Item Value
RNA id TU18432
length 244
lncRNA type inter_gene
GC content 0.46
exon number 1
gene id G14832
representative True

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 26522804 ~ 26523047 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

CTCAGACACATGTGCGTGGGCCTCAGCCATGGTCACTTTATGCTTGACAGGATGTACTTGTTTCTCGATTGTCCTCAGCTGGTGGAGTCTGGGTTCAGCCACTCTTGTGTGCTGGCCGATAAAGAGgccacactgacactggcaaTTGTGACCATGTATTGTACAGTGGAGGACAGTTGTTAATGAATGTTAGTAAAGGATAGTATTTGAGCTCTAACTGGAAGTCAAAGCTAAACTATGTCTG

Function

GO:

id name namespace
GO:0004055 argininosuccinate synthase activity molecular_function

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU18409 lncRNA downstream 4525 26427339 ~ 26518279 (-) False G14816
TU18418 lncRNA downstream 54705 26430455 ~ 26468099 (-) True G14818
TU18414 lncRNA downstream 54705 26463782 ~ 26468099 (-) False G14818
TU18416 lncRNA downstream 54705 26466325 ~ 26468099 (-) False G14818
TU18415 lncRNA downstream 90451 26430455 ~ 26432353 (-) False G14818
TU18442 lncRNA upstream 59479 26582526 ~ 26592300 (-) True AMCG00016643
TU18464 lncRNA upstream 103730 26626777 ~ 26631875 (-) False AMCG00016644
TU18490 lncRNA upstream 218038 26741085 ~ 26742338 (-) True G14882
TU18569 lncRNA upstream 456111 26979158 ~ 26983486 (-) True G14943
TU18574 lncRNA upstream 472126 26995173 ~ 27003707 (-) False AMCG00016662
AMCG00016634 mRNA downstream 75984 26442159 ~ 26446820 (-) True AMCG00016634
AMCG00016630 mRNA downstream 141075 26380048 ~ 26381729 (-) True AMCG00016630
AMCG00016627 mRNA downstream 148202 26373019 ~ 26374602 (-) True AMCG00016627
AMCG00016628 mRNA downstream 179190 26339493 ~ 26343614 (-) True AMCG00016628
AMCG00016629 mRNA downstream 213441 26304915 ~ 26309363 (-) True AMCG00016629
AMCG00016643 mRNA upstream 62349 26585396 ~ 26591527 (-) False AMCG00016643
AMCG00016644 mRNA upstream 103660 26626707 ~ 26643493 (-) True AMCG00016644
AMCG00016645 mRNA upstream 132541 26655588 ~ 26660740 (-) True AMCG00016645
AMCG00016642 mRNA upstream 139039 26662086 ~ 26664301 (-) True AMCG00016642
AMCG00016649 mRNA upstream 198740 26721787 ~ 26732090 (-) True AMCG00016649
TU18407 other downstream 2407 26427339 ~ 26520397 (-) True G14816
TU18405 other downstream 4525 26427339 ~ 26518279 (-) False G14816
TU18278 other downstream 281698 26239082 ~ 26241106 (-) False AMCG00016623
TU18225 other downstream 338026 26181744 ~ 26184778 (-) False G14676
TU18226 other downstream 338026 26181744 ~ 26184778 (-) True G14676
TU18445 other upstream 45622 26568669 ~ 26571641 (-) True G14843
TU18448 other upstream 45622 26568669 ~ 26571641 (-) False G14843
TU18636 other upstream 745773 27268820 ~ 27279334 (-) True AMCG00016671
TU18673 other upstream 846543 27369590 ~ 27370139 (-) True G15026
TU18738 other upstream 878629 27401676 ~ 27403922 (-) True G15067

Expression Profile