RNA id: TU21093


Basic Information

Item Value
RNA id TU21093
length 226
lncRNA type inter_gene
GC content 0.59
exon number 1
gene id G17006
representative True

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 37455176 ~ 37455401 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

CTTTGCATTCAAGGGCCACCCGTGACTCCAGGTTGTCCATCTGCAGCTGCAGGCGTTTGAGGGTGCGGTCAGCATCCCGGGACTTGCGCTTGTAGGCGATGaggacgatgatgatgatgaggaggagCAGGCCTCCTCCTCCGCCGATACCTATAATGGCGGGCAGCGTCAGCAGGCTGTCAGAGTAGATCTGCAGGGTCCCAGGAGAGTACTCGAAACCTCCCAC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU21092 lncRNA upstream 8750 37446172 ~ 37446426 (+) True G17005
TU21090 lncRNA upstream 20308 37434358 ~ 37434868 (+) True G17003
TU21089 lncRNA upstream 25780 37429153 ~ 37429396 (+) True G17002
TU21088 lncRNA upstream 28388 37426547 ~ 37426788 (+) True G17001
TU21087 lncRNA upstream 29305 37425666 ~ 37425871 (+) True G17000
TU21131 lncRNA downstream 492831 37948232 ~ 37986657 (+) True G17044
TU21157 lncRNA downstream 606633 38062034 ~ 38092679 (+) True G17064
TU21167 lncRNA downstream 634400 38089801 ~ 38117255 (+) True G17073
TU21183 lncRNA downstream 679772 38135173 ~ 38135840 (+) True G17089
TU21282 lncRNA downstream 936276 38391677 ~ 38392072 (+) True G17165
AMCG00016951 mRNA upstream 895195 36533936 ~ 36559981 (+) True AMCG00016951
AMCG00016950 mRNA upstream 930545 36501049 ~ 36524631 (+) True AMCG00016950
AMCG00016949 mRNA upstream 1153283 36299372 ~ 36301893 (+) True AMCG00016949
AMCG00016947 mRNA upstream 1202961 36241389 ~ 36252215 (+) True AMCG00016947
AMCG00016948 mRNA upstream 1252974 36102366 ~ 36202202 (+) True AMCG00016948
AMCG00016960 mRNA downstream 629889 38085290 ~ 38087536 (+) True AMCG00016960
AMCG00016966 mRNA downstream 866564 38321965 ~ 38336646 (+) True AMCG00016966
AMCG00016965 mRNA downstream 882244 38337645 ~ 38351463 (+) True AMCG00016965
AMCG00016970 mRNA downstream 940298 38395699 ~ 38399287 (+) True AMCG00016970
AMCG00016972 mRNA downstream 945329 38400730 ~ 38415204 (+) True AMCG00016972
TU20555 other upstream 3354313 34100315 ~ 34100863 (+) True G16550
TU20550 other upstream 3407456 34047371 ~ 34047720 (+) True G16546
TU20517 other upstream 3782556 33668629 ~ 33672620 (+) True AMCG00016901
TU20240 other upstream 4597736 32856361 ~ 32857440 (+) True G16289
TU20165 other upstream 4951920 32500796 ~ 32503256 (+) False AMCG00016854
TU21320 other downstream 1040650 38496051 ~ 38503632 (+) True G17193
TU21955 other downstream 4935896 42391297 ~ 42397787 (+) True G17697
TU22431 other downstream 6670813 44126214 ~ 44131602 (+) False AMCG00017078
TU22550 other downstream 7199251 44654652 ~ 44656098 (+) True G18192
TU23388 other downstream 11947318 49402719 ~ 49403634 (+) False AMCG00017173