RNA id: TU114844



Basic Information


Item Value
RNA id TU114844
length 201
lncRNA type inter_gene
GC content 0.56
exon number 1
gene id G92067
representative True

Chromosome Information


Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 15144535 ~ 15144735 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


TTCTCATCGTCCTCCATGATgcggaccctggaaaggaccttgatcttctcTTGCTCCTCCTGATAGAGGGCGGAGAGACTCAGTTTGACCCGGGCCACCTCCTCAGCTaggtcgaagcctctgagctgtaaaagaCTCAGGCGCTGGAAGCGGGCATTTAGATGGGAATATCTCGCCCGCCTCTCGCGAGCTTTCCGTTTc

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU114820 lncRNA downstream 87389 15056943 ~ 15057146 (-) True G92051
TU114819 lncRNA downstream 87912 15055292 ~ 15056623 (-) True G92050
TU114818 lncRNA downstream 89851 15054463 ~ 15054684 (-) True G92049
TU114785 lncRNA downstream 218575 14924393 ~ 14925960 (-) True G92024
TU114762 lncRNA downstream 344134 14800090 ~ 14800401 (-) True G92006
TU114846 lncRNA upstream 17583 15162318 ~ 15162712 (-) True G92069
TU114876 lncRNA upstream 340522 15485257 ~ 15485762 (-) True G92093
TU114916 lncRNA upstream 990645 16135380 ~ 16135707 (-) True G92132
TU114920 lncRNA upstream 1021904 16166639 ~ 16182063 (-) True G92134
TU114921 lncRNA upstream 1037394 16182129 ~ 16182328 (-) True G92135
AMCG00017648 mRNA downstream 64229 15075823 ~ 15080306 (-) True AMCG00017648
AMCG00017647 mRNA downstream 70016 15063427 ~ 15074519 (-) True AMCG00017647
AMCG00017645 mRNA downstream 91872 15043670 ~ 15052663 (-) True AMCG00017645
AMCG00017646 mRNA downstream 131767 15003446 ~ 15012768 (-) True AMCG00017646
AMCG00017638 mRNA downstream 379703 14760068 ~ 14764832 (-) True AMCG00017638
AMCG00017660 mRNA upstream 68762 15213497 ~ 15213745 (-) True AMCG00017660
AMCG00017659 mRNA upstream 78767 15223502 ~ 15234769 (-) True AMCG00017659
AMCG00017661 mRNA upstream 1640933 16785668 ~ 16797841 (-) True AMCG00017661
AMCG00017663 mRNA upstream 2242749 17387484 ~ 17394619 (-) True AMCG00017663
AMCG00017664 mRNA upstream 2280676 17425411 ~ 17462601 (-) True AMCG00017664
TU114641 other downstream 664748 14433158 ~ 14479787 (-) True AMCG00017631
TU113928 other downstream 4647431 10361300 ~ 10497104 (-) True AMCG00017556
TU113686 other downstream 6388628 8755288 ~ 8755907 (-) True G91119
TU113572 other downstream 6629580 8496495 ~ 8514955 (-) True AMCG00017520
TU113456 other downstream 7147940 7992137 ~ 7996595 (-) True G90939
TU114907 other upstream 722212 15866947 ~ 15867647 (-) True G92124
TU114913 other upstream 885667 16030402 ~ 16030905 (-) True G92129
TU114912 other upstream 885721 16030456 ~ 16030905 (-) False G92129
TU115048 other upstream 2323870 17468605 ~ 17474339 (-) False AMCG00017665
TU115289 other upstream 3318049 18462784 ~ 18463176 (-) True G92436

Expression Profile