RNA id: AMCG00018681



Basic Information


Item Value
RNA id AMCG00018681
length 379
RNA type mRNA
GC content 0.60
exon number 2
gene id AMCG00018681
representative False

Chromosome Information


Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 17981140 ~ 17983017 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


GCAGGATGCGCAGCCGTAGTTGTGGTTGGGAATAAAACTACACGTCCCAGAATCCTTTCACCATTTCCGTTTCCGCTCTGGGGCTACTACCGCTTTCAACATGGCGCTCGGTCGGCAGATCTACAACTTGCTCTTCAAGAGGACCTCCACCTTCACCCTGACCATCGTGGTGGCGGCCGTGGTGTTCGAGCGGGCCTTCGACCAGGGCGGAGATGCCCTCTTCGAGCAGCTCAATCGCGGGCACTGGTGGAGACCCCCAGTAGGAGACCTCGGACCCCCAACCCCCGGGTCGCCATGCCCGGCAATAGACACTCAACTCAATTCCCTCCAGCCGCCACGACCAACAGCGGACACCACTCTGGCCATCATCCACCTGTGA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU147816 lncRNA upstream 201 17979011 ~ 17980939 (+) True G117959
TU147720 lncRNA upstream 396028 17584751 ~ 17585112 (+) True G117887
TU147627 lncRNA upstream 728117 17250869 ~ 17253023 (+) True G117813
TU147622 lncRNA upstream 756531 17224012 ~ 17224609 (+) True G117808
TU147619 lncRNA upstream 819417 17161514 ~ 17161723 (+) True G117805
TU147877 lncRNA downstream 235744 18217803 ~ 18218099 (+) True G118005
TU147886 lncRNA downstream 484309 18466368 ~ 18730812 (+) True G118013
TU147918 lncRNA downstream 692215 18674274 ~ 18676226 (+) True G118043
TU148025 lncRNA downstream 845538 18827597 ~ 18832243 (+) True AMCG00018712
TU148059 lncRNA downstream 924347 18906406 ~ 18908956 (+) False AMCG00018717
AMCG00018678 mRNA upstream 21615 17933745 ~ 17959525 (+) True AMCG00018678
AMCG00018679 mRNA upstream 114155 17840752 ~ 17866985 (+) True AMCG00018679
AMCG00018668 mRNA upstream 157540 17807007 ~ 17823600 (+) True AMCG00018668
AMCG00018673 mRNA upstream 177192 17797953 ~ 17803948 (+) True AMCG00018673
AMCG00018666 mRNA upstream 191700 17786712 ~ 17789440 (+) True AMCG00018666
AMCG00018685 mRNA downstream 40968 18023027 ~ 18035628 (+) True AMCG00018685
AMCG00018686 mRNA downstream 155986 18138045 ~ 18139541 (+) True AMCG00018686
AMCG00018698 mRNA downstream 363898 18345957 ~ 18437784 (+) True AMCG00018698
AMCG00018697 mRNA downstream 545684 18527743 ~ 18528121 (+) True AMCG00018697
AMCG00018693 mRNA downstream 580474 18562533 ~ 18571339 (+) True AMCG00018693
TU147595 other upstream 911470 17068212 ~ 17069670 (+) True G117786
TU147178 other upstream 3024560 14954564 ~ 14956580 (+) False AMCG00018602
TU147084 other upstream 3193007 14786623 ~ 14788133 (+) True G117383
TU147075 other upstream 3204646 14775789 ~ 14776494 (+) False G117379
TU146792 other upstream 3633399 14345090 ~ 14347741 (+) True G117178
TU147936 other downstream 737147 18719206 ~ 18721343 (+) True AMCG00018702
TU148213 other downstream 1466567 19448626 ~ 19450628 (+) False AMCG00018740
TU148369 other downstream 1989080 19971139 ~ 19974730 (+) True AMCG00018762
TU148559 other downstream 2277318 20259377 ~ 20260940 (+) True G118557
TU148611 other downstream 2391937 20373996 ~ 20374812 (+) False AMCG00018781

Expression Profile