Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00018700 |
| length | 732 |
| RNA type | mRNA |
| GC content | 0.61 |
| exon number | 4 |
| gene id | AMCG00018700 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030135.1 |
| NCBI id | CM030135.1 |
| chromosome length | 28454832 |
| location | 18733107 ~ 18734584 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0003676 | nucleic acid binding | molecular_function |
| GO:0000166 | nucleotide binding | molecular_function |
| id | description |
|---|---|
| K21123 | SRSF9, SFRS9; serine/arginine-rich splicing factor 9 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU147886 | lncRNA | upstream | 2295 | 18466368 ~ 18730812 (+) | True | G118013 |
| TU147918 | lncRNA | upstream | 56881 | 18674274 ~ 18676226 (+) | True | G118043 |
| TU147877 | lncRNA | upstream | 515008 | 18217803 ~ 18218099 (+) | True | G118005 |
| TU147850 | lncRNA | upstream | 750090 | 17981210 ~ 17983017 (+) | True | AMCG00018681 |
| TU147816 | lncRNA | upstream | 752168 | 17979011 ~ 17980939 (+) | True | G117959 |
| TU148025 | lncRNA | downstream | 93013 | 18827597 ~ 18832243 (+) | True | AMCG00018712 |
| TU148059 | lncRNA | downstream | 171822 | 18906406 ~ 18908956 (+) | False | AMCG00018717 |
| TU148164 | lncRNA | downstream | 488790 | 19223374 ~ 19227433 (+) | True | AMCG00018732 |
| TU148221 | lncRNA | downstream | 721558 | 19456142 ~ 19456983 (+) | True | G118285 |
| TU148226 | lncRNA | downstream | 733239 | 19467823 ~ 19473460 (+) | True | G118290 |
| AMCG00018708 | mRNA | upstream | 3601 | 18729036 ~ 18729506 (+) | True | AMCG00018708 |
| AMCG00018702 | mRNA | upstream | 11968 | 18719468 ~ 18721139 (+) | False | AMCG00018702 |
| AMCG00018701 | mRNA | upstream | 42868 | 18685139 ~ 18690239 (+) | True | AMCG00018701 |
| AMCG00018692 | mRNA | upstream | 73709 | 18646519 ~ 18659398 (+) | True | AMCG00018692 |
| AMCG00018691 | mRNA | upstream | 127245 | 18590966 ~ 18605862 (+) | True | AMCG00018691 |
| AMCG00018711 | mRNA | downstream | 74792 | 18809376 ~ 18821287 (+) | True | AMCG00018711 |
| AMCG00018712 | mRNA | downstream | 93116 | 18827700 ~ 18840095 (+) | False | AMCG00018712 |
| AMCG00018710 | mRNA | downstream | 111992 | 18846576 ~ 18869867 (+) | True | AMCG00018710 |
| AMCG00018716 | mRNA | downstream | 142186 | 18876770 ~ 18885979 (+) | True | AMCG00018716 |
| AMCG00018717 | mRNA | downstream | 159751 | 18894335 ~ 18908931 (+) | True | AMCG00018717 |
| TU147936 | other | upstream | 11764 | 18719206 ~ 18721343 (+) | True | AMCG00018702 |
| TU147849 | other | upstream | 750804 | 17981210 ~ 17982303 (+) | False | AMCG00018681 |
| TU147848 | other | upstream | 750993 | 17981210 ~ 17982114 (+) | False | AMCG00018681 |
| TU147595 | other | upstream | 1663437 | 17068212 ~ 17069670 (+) | True | G117786 |
| TU147178 | other | upstream | 3776527 | 14954564 ~ 14956580 (+) | False | AMCG00018602 |
| TU148213 | other | downstream | 714042 | 19448626 ~ 19450628 (+) | False | AMCG00018740 |
| TU148369 | other | downstream | 1236555 | 19971139 ~ 19974730 (+) | True | AMCG00018762 |
| TU148559 | other | downstream | 1524793 | 20259377 ~ 20260940 (+) | True | G118557 |
| TU148611 | other | downstream | 1639412 | 20373996 ~ 20374812 (+) | False | AMCG00018781 |
| TU148644 | other | downstream | 1779576 | 20514160 ~ 20514491 (+) | True | G118623 |
