RNA id: TU148656



Basic Information


Item Value
RNA id TU148656
length 281
RNA type TUCP
GC content 0.55
exon number 1
gene id G118635
representative True

Chromosome Information


Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 20592736 ~ 20593016 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATCCTGCAACATTTTATGCTCTTTCTTCATCTGGGCCTCCTTATCATCCGAGACCTTGTAGGCGTTGTGAAAAGCCTCCTCGAGCTGCTTGAGCCTGGCCTTCAGCCTGCCGACAGTGCCGTCCTTCTCCTTGCTGCTGTTCTTCACTTCATCCAGGCGCTGCTGCAACGCTTTCACAGTGGCGTTGGCCGTGTCGTAGCGGTCCGGCCAATCCGCCTTGAAAACACAGAAGAACCAGCATCCTTTAGATCAGTATACCTCAGCCCACTCTCCCCGAGGAG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU148655 lncRNA upstream 314 20592075 ~ 20592422 (+) True G118634
TU148653 lncRNA upstream 811 20591685 ~ 20591925 (+) True G118632
TU148652 lncRNA upstream 1186 20591193 ~ 20591550 (+) True G118631
TU148654 lncRNA upstream 1561 20590563 ~ 20591175 (+) True G118633
TU148651 lncRNA upstream 2234 20585628 ~ 20590502 (+) True G118630
TU148658 lncRNA downstream 2157 20595173 ~ 20595580 (+) True G118637
TU148659 lncRNA downstream 3452 20596468 ~ 20596692 (+) True G118638
TU148660 lncRNA downstream 4085 20597101 ~ 20597607 (+) True G118639
TU148661 lncRNA downstream 4859 20597875 ~ 20598118 (+) True G118640
TU148662 lncRNA downstream 6775 20599791 ~ 20600356 (+) True G118641
AMCG00018782 mRNA upstream 107807 20477126 ~ 20484929 (+) True AMCG00018782
AMCG00018789 mRNA upstream 129387 20457965 ~ 20463349 (+) True AMCG00018789
AMCG00018783 mRNA upstream 159081 20408073 ~ 20433655 (+) True AMCG00018783
AMCG00018784 mRNA upstream 194399 20383129 ~ 20398337 (+) True AMCG00018784
AMCG00018781 mRNA upstream 217989 20374037 ~ 20374747 (+) False AMCG00018781
AMCG00018792 mRNA downstream 8995 20602011 ~ 20603279 (+) False AMCG00018792
AMCG00018793 mRNA downstream 37987 20631003 ~ 20637704 (+) True AMCG00018793
AMCG00018791 mRNA downstream 49313 20642329 ~ 20645241 (+) True AMCG00018791
AMCG00018799 mRNA downstream 77820 20670836 ~ 20678821 (+) True AMCG00018799
AMCG00018800 mRNA downstream 86264 20679280 ~ 20695194 (+) True AMCG00018800
TU148644 other upstream 78245 20514160 ~ 20514491 (+) True G118623
TU148611 other upstream 217924 20373996 ~ 20374812 (+) False AMCG00018781
TU148559 other upstream 331796 20259377 ~ 20260940 (+) True G118557
TU148369 other upstream 618006 19971139 ~ 19974730 (+) True AMCG00018762
TU148213 other upstream 1142108 19448626 ~ 19450628 (+) False AMCG00018740
TU148657 other downstream 350 20593366 ~ 20594139 (+) True G118636
TU148663 other downstream 8940 20601956 ~ 20603315 (+) True AMCG00018792
TU148789 other downstream 162613 20755629 ~ 20756220 (+) False AMCG00018802
TU148883 other downstream 594940 21187956 ~ 21189246 (+) True G118815
TU149795 other downstream 4641066 25234082 ~ 25267781 (+) True G119507

Expression Profile