RNA id: XM_043240720.1


Basic Information

Item Value
RNA id XM_043240720.1
length 6070
RNA type mRNA
GC content 0.42
exon number 4
gene id klf7a
representative True

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 5038724 ~ 5075611 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

TACGCTGGCTCCACACACTGACTGACACAGTAACCTGTGCGCTACTGTGCTCCCGCTGCTCCCCTTCCAGAAACATTgtgaggaaagaaaacaaacctgCATGGATGGATCCTTtacttttaaacacattttagtatCCATAGTGAACTGAAACGTTTCGGATTTCGCGATTGATCTGAATGTTTCAGTCGCTCGCGCTGAAGCGAACGCGGATTCCTCGCGCAGAGAATCAAAGTCTCTCTAACGCACCGTTTAGCTGCACAAACATGGATGTTCTGGccaattacagtatttttcaaGAACTTCAACTTGTTCATGACACTGGCTACTTCTCCGCGATGCCGTCTCTGGAGGAAAACTGGCAGCAGACATGTTTGGAGTTGGAACGCTATCTACAGACGGAACCCAAACGGCTCTCCGATCTTTTTGACGAGGAACTAGACGGCCTACTTACCCCCTCCTTCATGAAGGAAGATGTGGATGAAGACCTGTTAGACCCGCTCCTTCCCAGCCTCAACAACCCCCCCagccctcctcctcctcagctCACCCCACGCAAAGAAACCCTGTCCTCCACTTCCTCTACCGTGACCTCTCCAGACATCACCTTAGGGGTCAACGCAGCCCAGCTGAATGCCGTCACCTCACTAACACCTCCCTCGTCCCCGGAACTGGGCCGTCACTTAGTCAAACCCACCCACACACTCAGTGCCTCGCCCGACGGGACCCTCACGCTCAAGCTTGTGGCCCGAAAGGTGGGCTTAAGTTCTGCCAAACTTGTGGCGGCCCACCCTGTGCCGCTTTCTCCGCAGCATGGCAGCAGCGGCGCACAGAGCGACGGAGAACAGGGCGGCCCCTGCACCGTGGGAGCTGGCGAGATGGCAGAGAACAAGAAGAGAGTCCATCGCTGCCAGTTCAACGGGTGTCGGAAGGTCTACACCAAGAGCTCACATCTGAAGGCGCATCAGAGGACACATACAGGGGAGAAGCCGTACAAGTGCTCATGGGAAGGCTGCGAATGGCGGTTCGCGCGAAGCGACGAGTTGACGAGGCACTACCGCAAACATACCGGCGCCAAGCCTTTCAAGTGCAATCACTGCGACAGGTGTTTCTCCCGATCCGATCACTTGGCACTGCACATGAAGAGGCAcatctgaggaggaggaggtggcaAAATGgcgaggtggaggaggagacggAAGGTAgagggagagaaggagagggaTGATGGGAAGGAGCCGGATACCACTCAGGCCGTTCGCTCCTCCCACCAAGAGTGGCCTCCCGTAGGGGAACCGATCAGCACGGGCTGAACTTAGACCAGGTCTTGAGGATTGGTCGGCCACGTCTGATCATGAGGATGGAAATTCAGAGGTCTACAGATCTGAGAAGGTGGTACGACATTTTATGTCACTTAATGTGCTTCAGTAGGTATTTGCCCAATGCTCAAAACTTAAAAAGATACTATTATTGCGTTCCAACTTCTCTGAGAAACATTGAAAGCTTTCATCAGTCTTACATAGAGTATGTCACAAACAGACAGGATGTGTCCCAAAATGATCTTCTCAAAAACCTTCGGAGAACATCGTAGCGATAGGATGTTATTtcaaaggaattttttttttttttgtttcccatTTTGAGCAAGGATTATCTTTCCGCTTTGATCCCGCCAATCCACAGCCAAGATCTAAAGTGGAACGTCCATTCAGAGAAATCTAGACTTCAAAGGTGAAGTGGACTCACCCATCGCTCAAATGTGAATCTGATTGGGGGCAGTGGAGGAAACACTCTTACCTTCTTCGCAGACAGATTAATCTCTCTTTCACGTCCCTCCCTGCCAACCAACTGCTGCGCAGCGACACTTTGAGactttttataaaagaaaaaaaaaaataaagaagagatCTTTTTGAATGATGACTGTGTTATATAATTCAGAAGacttcttttttgcttttctccTGTGGATGTgtacaaaatagaaaaagaaaattacataaaaatggaccaaaaaaaaaaaaaaaaaaaaaaaactgccataTGCACAAGCGAAGAGTAGTGGATTCTACACTGGCACAGACAGAGGTGGACTTCATTTCTATAGAAACGCAAACTTTTAGtggtgaaaaaaagaaaagaaaagaaaagaaaagcaatgtTGTTGTTGCACACGTTTTGAGCATTCCTCAACATTATTTATGACCCATGAAACGTTATCCCATAAACTTGGGTTCCTTCGGGATTTCTAGGACTAGCATGAAATGAGAAAAGCACCATGGTTTATCTGCGGACTTCACTACAGAATAATGACTTCCATCATTCAAGGCAGAGATTTGCAATCACAACGTTTAGATTCTGTAAATGCATCACGGTATGTCCCGAAAAACTGTCCGGACAGACATTTCCCatcagttattttagtttgcACGGATGGAAGCATCCTAAGAaaggtgtgtgttgtgtttcgCTGGTCCTGCAGGTGactttgtgatgtttttttttctttgttttttttttcttacacattaCATATCTTGTGTTCCCGGTAAAAACAGCTGTACAGTGTGTAAATTGTATAGTAAAAGTGAGGTTTAAATTACAACGTACAATCAAGTGTGGGATGGAAAGTGTTCCTGAATGTAAGGTTGTTTGATTGTGGACGGCCCTGCACTTATGCAATCATTCAGACCACTGAAAGGCCTGATCTTCTCAACATAGATCCCACTTTGGCTCATGCATGAAGATCTACACGAATGCTTGTTGATGAAGGAATAATTCACATCAAATGAGAAATCGGTCATCGTTTACTCAAcctaatgtcattccaaaccagtatgactttctttccttGGTGGAACGCTAAAGAATGGAAAACAGGAACGGAGgctgtcaaacaaaaaaaaaagacattgaagGACCATAAAAATAGTCTATAGTGCGACTGTAATTCAAGACTTGTGCGAAACGGACCAAAATTTACTCGTTATTCAAGTCTTACTTTTTTGCGGTAGCTCTTGAATCTCATTCTCACttccatattttcaaaatgacaaataagaCATGGAAAAAGCTTGGGTTTTAGGACAAAAGTATCTTCGCGCACCTATAATACGTAAGATTTCAGATTTCATTGAAGCTGcttttatgttatatatgaaaatgataGTCGAACACCAATAGCCTCACAGTGACTCGAGTTTGATTCCCAATCCCGATTCCCAATATTTTCCTGTCATAAGTCATACAGCTTTGGACCAACATGAAGgtcaataaataacaatttcatgTGAACTATTGCTTTTCCAACAACCTGATTAAGCggttttgtgttcatttgtgtGATTAAACTGAGAGGCCGAGATCTGAAGATGTATAAAATGAGCACAAACAACAtagatttgctttattttttaaccacCGCACTGTATATAAACATCAAGATGCCGATTCAAAGACTTATAAACCCCTGAGATCAATGCATAAACGGaaccaaaattaaattttagacAGCATAcacattagcatttttattgcatatcaTGACCTTTATTAACCATATCTACAGATCATAAAAAGCACCATCTGGATCATATCACCCAAAAATAGGTGATGGACAAGGATATTCATGTCTTGCTCAAGCCGTCTGTCAGTTTTTTGCCCTTCTCACTCACTTGTCTAACATGGACCAACGGGAGGCCCGTCTGACAGAATGGCAGTATGGGTAATGAGAAAGGAATTGGGCTCTCCCGGCTGCGGCCAGCGCTGGTCGCCCTCTCAATGGGGCGGAACGGAGTAGGACCACACTGGGGGTCGGACGCCACACTTATGCTGACCGGGAGATCTTATCGCAACCGCCCGACACAGTCAATTTCACCATGTAGCCGGGTGTCAGCTTACCTCCTTCCCTAGCCACATTAGCTCcatgaaaaataacaaagacACAAGGTCACCGGAATCCAGAGCAGAGCCGCGTGCATCCGATGTCCTCAAGAGACCATCGCACGGGCCGCTTTTCCAGCTGAAATCTAGTGCATGATATCTGCTTTTCATAGAGGATTCAAGACTGCAACCTGAAATGTTACAATTTATCTGTAGTTCAGAAAACATGATCGTGGGCTATGCAGACTAGGAAGCGAAGCTTCATGTTGTCCCACATTTTTGGGCAAAACAATCCAATGTCAAGTCTCGAAAACTATTAGTAGATCAATCCTGTTGATCATGTATGCAAGATAATAATTTCAGTTTGACAAAGACTTAGATTTGATATTGGTGCACACAATAGTATTTGTTTTAGGGTCTATGGCGAGAAGGATAAACTCCATACGATAAATAACATCACAAACACGTTTCATATTTCACCTCGAAAAACGAAAGAGATAATACTGAGATTAAATGAGGCGTTTATTCTGCAGTGTGACATTATTACCCAATTCTCATTTAAAGTTGCAGTTCTTAACTTTGTTTTGGTTCAAAATGATGCTAAATCAGTTATTGGGCAAGTAACCAGCCAGTGTTGAAAACTTTCCTTAGCGATCTCCTTAACTTAGCTTGATTTATTGGTAATAAACAATAGTCAAGcgaaatatttaacatgttgATAACAAAGTATATGAATAACCagtatatatgaataaacagaacaaaagcGGCAGACATGTCCAGTGAAAATTAACATTTGGTTCATACGGTGTATATTGATAGTCACatacaaagaggcaaaacttatggactgcagctttaactgtaatatatttaataaataatgtaaaattgtacAACTATACATGTAATGTAACTATATATGTAATCGTataacaatatatgtatatgttcatAAACAATACTGTCATGATAATATTGTCACGAtgcaaaataatgttaattgGCAGTTTTAGGTGAAATATGACGTAGGCATTTCTCGTCAGGCTTTGTGAGGACAGTGTTCACATCACAAGTCTTGTGCTGAAATTCTCACGGAGCTTGTCAAGTTATTGCATTCTATGAATCAAGATATATGATGTTCACTAGTAGTTTTCCCAGTGGACATTTGACCATTTGTTCACTTTAAGTGCACCTTTTTCTTAAAACCCTTCTTTAACATCCTCCAGCCGGACCAATTAGGCATGTTACCTTGGCAAAAACTAGCTAATGAGTTCGTCTTAATGGTCCTGAGAAACCCCACAGAGCAGCTCGTTGTCTGCTTTTTAGGGCTTGTTTTATGTGCGCCGTCTTTAGTTTCTCTCGAGTGTGTATAAACCTTGTATGTTACCCACTTAAACGGCTTTTAAATCGCACAGACAACTAACTGACCTTTTTGCTGTGGGACAATGCAATGATTTGTAATTACCGATGCACACTTGCAGGTACGTTTTTTTACATTCGGCAATGAAACGGTTCCATCTTAAAGATCTGGCATGAGCTGAGACACCACTAAACATGCAGGGAACACTGAATTAGGAGTTCGAATGCATTTCATAATTCGTGACGTTATGATTAGTCCGCTTTAGAGGTCTGTACATGTTATAGTTATGTTTTTGGATTGACGCATTAGTCTATACGTTCACGTTAGCAGCTGGTCTCCATTCGCTCACTAGACATCTGAAGCATTGTTTCCTTTGTACCCTTCTATTGCTCAAAACGCTGTGCTAAAAGCTTTCAAATGGACGGTATGAAGCCGATAAACAGAGTGATTTCCAATGTTCGTTGCACTCGTAGCATAGTTTTCTGGTTAAAGGCTTTTTTCCACACTTCCTGCTGTAAATTAAATCTGTTCCGATCCCTCTGCTTTTCGCAGGCATTTCATGCTTTCCACTCTGCTCCTATATTTATgccgttttttatttttgttttatttgctgtaaaaagtgtttgcatatattatttgtattatatgaTGTTAGTATGACAATGTTCTTTAttaaggaaaaaggaaaagagtttatttttgttaccggtttgtttcataattcttttttaaattggtATTGTAATATATCTATGCAAGAACTGTTAAgtgaagcatttttatttaagaatgtCATTATGTGTAATAAATGGTAGAATCTTA

Function

GO:

id name namespace
GO:0046872 metal ion binding molecular_function
GO:0003676 nucleic acid binding molecular_function

KEGG:

id description
K09207 KLF6_7; krueppel-like factor 6/7

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU1430 lncRNA downstream 81668 4956378 ~ 4957056 (-) False mdh1b
TU1411 lncRNA downstream 101036 4935720 ~ 4937688 (-) True G978
TU1402 lncRNA downstream 108023 4929364 ~ 4930701 (-) True G973
XR_006251107.1 lncRNA downstream 175759 4861001 ~ 4862965 (-) True LOC122346181
TU1385 lncRNA downstream 289839 4747490 ~ 4748885 (-) True G959
XR_006251096.1 lncRNA upstream 69731 5145342 ~ 5145793 (-) False LOC122346132
TU1503 lncRNA upstream 69830 5145441 ~ 5146126 (-) True LOC122346132
TU1499 lncRNA upstream 74882 5150493 ~ 5151842 (-) True G1028
TU1618 lncRNA upstream 479879 5555490 ~ 5555750 (-) True G1114
TU1619 lncRNA upstream 481269 5556880 ~ 5557342 (-) True G1115
XM_043240805.1 mRNA downstream 78514 4956119 ~ 4960210 (-) True mdh1b
XM_043240448.1 mRNA downstream 141824 4765299 ~ 4896900 (-) False pard3ba
XM_043240440.1 mRNA downstream 141824 4765299 ~ 4896900 (-) True pard3ba
XM_043240468.1 mRNA downstream 299264 4677795 ~ 4739460 (-) True nrp2a
XM_043240460.1 mRNA downstream 299265 4673689 ~ 4739459 (-) False nrp2a
XM_043241868.1 mRNA upstream 536297 5611908 ~ 5616115 (-) True mxa
XM_043236157.1 mRNA upstream 550099 5625710 ~ 5629067 (-) True LOC122342384
XM_043242075.1 mRNA upstream 570535 5646146 ~ 5655085 (-) True efnb2b
XM_043242159.1 mRNA upstream 581026 5656637 ~ 5661762 (-) True arglu1b
XM_043241616.1 mRNA upstream 670859 5746470 ~ 5766103 (-) False radil
TU1193 other downstream 739531 4298310 ~ 4299193 (-) True G820
TU1152 other downstream 1024437 4007840 ~ 4014287 (-) True G782
TU999 other downstream 2349260 2688765 ~ 2689464 (-) True G654
XR_006250784.1 other downstream 3433740 1594758 ~ 1604984 (-) False LOC122343438
XR_006252053.1 other downstream 3909087 1129499 ~ 1129637 (-) True LOC122353706
XR_006252050.1 other upstream 701960 5777571 ~ 5777657 (-) True LOC122353693
XR_006251180.1 other upstream 770465 5846076 ~ 5853244 (-) False LOC122346875
TU1845 other upstream 1035852 6111463 ~ 6113523 (-) True G1270
XR_006251170.1 other upstream 1192052 6267663 ~ 6274751 (-) False si:ch211-14k19.8
XR_006251174.1 other upstream 1382440 6458051 ~ 6468254 (-) False gaa2

Expression Profile