RNA id: TU115467


Basic Information

Item Value
RNA id TU115467
length 488
lncRNA type sense_over
GC content 0.53
exon number 2
gene id G78048
representative True

Chromosome Information

Item Value
chromosome id NC_056709.1
NCBI id CM032078.1
chromosome length 24513629
location 169465 ~ 254515 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

cacacacacacacacacacacacacacacactcacacactctcacacacacacacacacacacacacacacacacacacacacacacacacacacacacactctctcacacacaattacacgGAGGCGGTAATCCTGGTTAAATCGCGCGCTGTGACGCAGACAGGAGTTCTCGGGGTTGTTTTGTAGTCGATATCGCTCTGATCGTGACGCGCTGTAATCCTCCTCTCTATCGACGCTGCTCTCGCTCGCCGCGCTACGGCTCACCAACTCGTGATCCCTTCATCGGACATGTATTCCTCCTCACGCCATAAACACAGCTCATTTTATTACCATAAGACGTGAAAGTGTGTCTGTTCCCGACCGCCGTGTTTCTGAAGGCCTCCCAGAAGCGTTTGACAAACGACGCGATGACGTCACGCGCGCGCTCTTCTTCTGGTTCTATTCTGACGTGTTTGACAGAACGTCACTCTGACGCGGCGGCGCCCC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU115456 lncRNA upstream 5715 162462 ~ 163750 (+) True G78038
TU115507 lncRNA downstream 16481 270996 ~ 390781 (+) False G78067
TU115514 lncRNA downstream 84321 338836 ~ 339676 (+) True G78072
TU115487 lncRNA downstream 96104 350619 ~ 350944 (+) True G78061
TU115461 lncRNA downstream 113288 367803 ~ 372991 (+) True LOC122354311
XR_006252102.1 lncRNA downstream 117911 372426 ~ 373639 (+) False LOC122354311
XM_043251980.1 mRNA upstream 52964 69645 ~ 116501 (+) True LOC122354020
XM_043251325.1 mRNA upstream 104332 63006 ~ 65133 (+) False LOC122353551
XM_043251865.1 mRNA downstream 26165 280680 ~ 281562 (+) True LOC122353958
XM_043252499.1 mRNA downstream 94065 348580 ~ 350442 (+) False LOC122354326
XM_043252190.1 mRNA downstream 97440 351955 ~ 365169 (+) True LOC122354142
XM_043252191.1 mRNA downstream 97440 351955 ~ 365169 (+) False LOC122354142
XM_043251538.1 mRNA downstream 142676 397191 ~ 403408 (+) True si:ch211-159e12.5
TU115433 other upstream 104317 63019 ~ 65148 (+) True LOC122353551
TU115474 other downstream 78554 333069 ~ 334396 (+) True G78055
TU115515 other downstream 94002 348517 ~ 350439 (+) True LOC122354326
TU115525 other downstream 154818 409333 ~ 410684 (+) True G78083
TU115526 other downstream 157524 412039 ~ 412753 (+) True G78084
TU115545 other downstream 333469 587984 ~ 595328 (+) False iars1

Expression Profile