Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU115972 |
| length | 240 |
| lncRNA type | inter_gene |
| GC content | 0.39 |
| exon number | 1 |
| gene id | G78370 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_056709.1 |
| NCBI id | CM032078.1 |
| chromosome length | 24513629 |
| location | 1195224 ~ 1195463 (+) |
| genome version | ASM1883169v1_2021_tiger_barb_Genome |
| species | tiger barb (Puntius tetrazona) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| XR_006252047.1 | lncRNA | upstream | 120644 | 1071074 ~ 1074580 (+) | True | LOC122353680 |
| TU115811 | lncRNA | upstream | 155014 | 1034532 ~ 1040210 (+) | False | tsen2 |
| TU115777 | lncRNA | upstream | 281425 | 889060 ~ 913799 (+) | False | atg7 |
| TU115531 | lncRNA | upstream | 770146 | 424386 ~ 425078 (+) | True | G78089 |
| TU115523 | lncRNA | upstream | 786820 | 405735 ~ 408404 (+) | True | G78081 |
| TU115991 | lncRNA | downstream | 21761 | 1217224 ~ 1222835 (+) | True | G78380 |
| TU116026 | lncRNA | downstream | 81052 | 1276515 ~ 1277127 (+) | True | G78400 |
| TU116101 | lncRNA | downstream | 224881 | 1420344 ~ 1421787 (+) | False | rbms2a |
| TU116102 | lncRNA | downstream | 227270 | 1422733 ~ 1425764 (+) | True | G78455 |
| TU116118 | lncRNA | downstream | 274205 | 1469668 ~ 1471384 (+) | True | G78467 |
| XM_043251570.1 | mRNA | upstream | 3799 | 1186911 ~ 1191425 (+) | False | LOC122353696 |
| XM_043252534.1 | mRNA | upstream | 15425 | 1168152 ~ 1179799 (+) | True | znf831 |
| XM_043252533.1 | mRNA | upstream | 15425 | 1168168 ~ 1179799 (+) | False | znf831 |
| XM_043251517.1 | mRNA | upstream | 89518 | 1098493 ~ 1105706 (+) | True | nuf2 |
| XM_043251515.1 | mRNA | upstream | 89518 | 1098564 ~ 1105706 (+) | False | nuf2 |
| XM_043251324.1 | mRNA | downstream | 16384 | 1211847 ~ 1213545 (+) | True | ppp1r3db |
| XM_043251564.1 | mRNA | downstream | 65320 | 1260783 ~ 1264227 (+) | False | acot8 |
| XM_043251563.1 | mRNA | downstream | 65344 | 1260807 ~ 1264227 (+) | True | acot8 |
| XM_043251561.1 | mRNA | downstream | 68822 | 1264285 ~ 1269596 (+) | True | srsf6b |
| XM_043251958.1 | mRNA | downstream | 74620 | 1270083 ~ 1276013 (+) | True | ift52 |
| TU115960 | other | upstream | 3503 | 1186866 ~ 1191721 (+) | True | LOC122353696 |
| TU115925 | other | upstream | 117825 | 1074744 ~ 1077399 (+) | False | cnbpb |
| TU115926 | other | upstream | 117825 | 1074744 ~ 1077399 (+) | False | cnbpb |
| XR_006252083.1 | other | upstream | 488674 | 603138 ~ 706550 (+) | False | atp2b2 |
| TU115545 | other | upstream | 599896 | 587984 ~ 595328 (+) | False | iars1 |
| TU116128 | other | downstream | 290244 | 1485707 ~ 1510874 (+) | False | rargb |
| TU116164 | other | downstream | 395281 | 1590744 ~ 1593125 (+) | True | G78500 |
| TU116178 | other | downstream | 449168 | 1644631 ~ 1726097 (+) | True | G78506 |
| TU116166 | other | downstream | 482774 | 1678237 ~ 1680177 (+) | False | nabp2 |
| unassigned_transcript_1592 | other | downstream | 664834 | 1860297 ~ 1860368 (+) | True | trnaq-uug_15 |
