RNA id: XM_043251863.1


Basic Information

Item Value
RNA id XM_043251863.1
length 1069
RNA type mRNA
GC content 0.44
exon number 6
gene id LOC122353953
representative True

Chromosome Information

Item Value
chromosome id NC_056709.1
NCBI id CM032078.1
chromosome length 24513629
location 190906 ~ 192857 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

AAGAGTTACTATTCAGACAGATCCTCATTCCATAAGATCTGTACATTTCTCAGCAGTATTTTGGCTATATAAGCTTTCACTGAACAGCACTAACACACACCGAATGAAGGACCATCCACACCGAATCCTCATCTGACAAGAGAAGGTCTGTGATTTGGAGAAATGAAGGTTTATCAGAGCGTCCTGCTTCTCTTCAGCTGCCAGTTACTTCCTACTCTGGCTTTAGACTGTACCGTGATGAGCGGTAACCTGAAGCAGATAGACGCTGGGTCTGGTTTAGTCAGCGGAGTGAACATTTATAACGAGGTGTTCATCCTGGAAGATAACGTCTTCTCAAAGATCAACATGTCTCTGAAGCATTTCAGTGTTGGTCCTGCTGGTCAGCTCGGGGTGGATGCAGCAAACAACATCTTCAAGCTTCAGAGTGGCAGGTTTATTCAGTTTCCAGGACTTCTCAAACAGGTGGATGCTGGAGGCGATCAGATCATTGCAGGAGTCAATATGAATGATGACATATTCTGCTTAAATATGGATGCTAACGACAAATGGCCATCCAGCAGTATTCCTTGGACTCAGATCGGTGGAAAGCTGAAGTATTACAGCTGTGGTCCGTACAGCTGCTGGGGCGTCAACAGCTACGACCAAATCTACATCAATAGGGATGTGTCTAATAATGCCTGTTCTGGGAGTGGCTTTGTGAATATTCCTGGACTTCTGTCCATGATTGAAGTAGCAACTGATGGCAGCGTCTTTGGTGTTAACTATCAAGGGAATTTGTACCAAAGAACTGGCGTCTCTCGCGCCAACCCGTCTGGCACGGACTGGATCTCAATGGTTGTCTGTCCCAGCAGCCACAAGCATGTGAGCTTCGACCTGGGAGTGCTGTGGGTGGTGTGTGTGGACGGCTCCATCCGTAAATGTACTTTATAGAGAAACAAGAATTCTCAGAGTAAACTAATTATGATGATCAAAGTCATTATTAACAGAAAGCCAAGAGCTTGATTgtacattcttttcttttttcttttccttctttcttgttgaataaataaagcatctATCTCATCAA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU115471 lncRNA upstream 16433 171385 ~ 174473 (+) True G78052
TU115456 lncRNA upstream 27156 162462 ~ 163750 (+) True G78038
TU115492 lncRNA downstream 54497 247354 ~ 367172 (+) True G78063
TU115497 lncRNA downstream 57763 250620 ~ 251865 (+) True G78066
TU115507 lncRNA downstream 78139 270996 ~ 390781 (+) False G78067
TU115514 lncRNA downstream 145979 338836 ~ 339676 (+) True G78072
TU115487 lncRNA downstream 157762 350619 ~ 350944 (+) True G78061
XM_043251980.1 mRNA upstream 74405 69645 ~ 116501 (+) True LOC122354020
XM_043251325.1 mRNA upstream 125773 63006 ~ 65133 (+) False LOC122353551
XM_043251865.1 mRNA downstream 87823 280680 ~ 281562 (+) True LOC122353958
XM_043252499.1 mRNA downstream 155723 348580 ~ 350442 (+) False LOC122354326
XM_043252190.1 mRNA downstream 159098 351955 ~ 365169 (+) True LOC122354142
XM_043252191.1 mRNA downstream 159098 351955 ~ 365169 (+) False LOC122354142
XM_043251538.1 mRNA downstream 204334 397191 ~ 403408 (+) True si:ch211-159e12.5
TU115433 other upstream 125758 63019 ~ 65148 (+) True LOC122353551
TU115474 other downstream 140212 333069 ~ 334396 (+) True G78055
TU115515 other downstream 155660 348517 ~ 350439 (+) True LOC122354326
TU115525 other downstream 216476 409333 ~ 410684 (+) True G78083
TU115526 other downstream 219182 412039 ~ 412753 (+) True G78084
TU115545 other downstream 395127 587984 ~ 595328 (+) False iars1

Expression Profile