RNA id: TU12245


Basic Information

Item Value
RNA id TU12245
length 698
RNA type TUCP
GC content 0.58
exon number 3
gene id G8167
representative False

Chromosome Information

Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 200092 ~ 223367 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

ccccggcacttggactcccggcacttggactcccggcacttggactcccggcacttggccACCCGGCACTTGGCCACCCGGCACTTGGCCACCCGGCACTTGGCCACCCGGCACAGCGTCAGAGCCCGAGGATGGGACAAGGTTTGGGTCACCAAAAGGGTATCCAGGATAGCCATAGGGCCAAGGCAGCTGGGGGAATTTGGGacgttgaggctttccatctggtccTTGGCCACCTGGCGCAGCGTCAGAGCCCGAGGATGGGACAAGGTTTGGGTCACCAAAAGGGTATCCAGGATAGCCATAGGGCCAAGGCAGCTGGGGGAATTTGGGacgttgaggctttccatctggtccTTGGCCACCTGGCGCAGCGTCAGAGCCCGAGGATGGGACAAGGTTTGGGTCACCAAAAGGGTATCCAGGATAGCCATAGGGCCAAGGCAGCTGGGGGAATTTGGGacgttgaggctttccatctggtccTGGCCACCTGGCGCAGCGTCAGAGCCCGAGGATGGGACAAGGTTTGGGTCACCAAAAGGGTATCCAGGATAGCCATAGGGCCAAGGCAGCTGGGGGTATTTGGGacgttgaggctttccatctggtaCTTGAGAAACTACGGTAGTTGTAACAGGTGTGTCTGTTTGCATAGACATAGAATAAACCCTTCCAGGATAAAGATAACTGGAAAA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU12255 lncRNA upstream 1301 210641 ~ 220744 (+) True G8169
TU12233 lncRNA upstream 6606 203646 ~ 215439 (+) False G8167
XR_006247264.1 lncRNA upstream 58398 162991 ~ 163647 (+) True LOC122325201
XR_006247266.1 lncRNA upstream 64973 142976 ~ 157072 (+) False LOC122325212
TU12260 lncRNA downstream 18497 241540 ~ 245364 (+) False LOC122325097
XR_006247265.1 lncRNA downstream 25438 248481 ~ 256886 (+) False LOC122325207
TU12266 lncRNA downstream 25717 248760 ~ 251979 (+) True LOC122325207
TU12308 lncRNA downstream 264737 487780 ~ 515969 (+) True G8207
TU12311 lncRNA downstream 342853 565896 ~ 566914 (+) True G8209
XM_043219950.1 mRNA upstream 47037 171622 ~ 175008 (+) True wu:fi34b01
XM_043219963.1 mRNA downstream 973 224016 ~ 233410 (+) True LOC122325083
XM_043220121.1 mRNA downstream 15699 238742 ~ 240396 (+) True LOC122325174
XM_043219987.1 mRNA downstream 18408 241451 ~ 244722 (+) True LOC122325097
XM_043261606.1 mRNA downstream 224207 447250 ~ 457745 (+) True LOC122360757
XM_043220006.1 mRNA downstream 336936 559979 ~ 564990 (+) True LOC122325106
TU12282 other downstream 224119 447162 ~ 450019 (+) False LOC122360757
TU12283 other downstream 224119 447162 ~ 450019 (+) False LOC122360757
TU12491 other downstream 576889 799932 ~ 828209 (+) False st6galnac5a
XR_006252350.1 other downstream 1321730 1544773 ~ 1554114 (+) False rc3h1b
XR_006252584.1 other downstream 1955723 2178766 ~ 2189365 (+) True LOC122358138

Expression Profile