RNA id: TU12255


Basic Information

Item Value
RNA id TU12255
length 339
lncRNA type inter_gene
GC content 0.45
exon number 2
gene id G8169
representative True

Chromosome Information

Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 210641 ~ 220744 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

AGTTTATTTAGCAATTGAAGACAGGACAAAAAACGCAGAATGTTCATGAACAGGAATCACTTTAGATTACCATTAAATCAGGAGGCAAATCTTTGAAAGCCACGTACAGCACATTACCAGTCTAATTCAACGCATCTAGCCACAATCCTCAGCTTCATGGGAAAGAGTTGGGGTCCAAAAAGTCCACAAATTGAAGTGCAAAGGGGTATTTTTCATACAGTACAGAGCTGGGAGGTACATATTGCTGGGGTGGCACATCAGGCTGGTTGGCAGAGGGCCAGCATTCAGCAGCTGCAGTTGTAGTACAGGGTTGAGGAGTAGTGGTTACAGGCTGTGCAG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
XR_006247264.1 lncRNA upstream 46994 162991 ~ 163647 (+) True LOC122325201
XR_006247266.1 lncRNA upstream 53569 142976 ~ 157072 (+) False LOC122325212
TU12260 lncRNA downstream 20796 241540 ~ 245364 (+) False LOC122325097
XR_006247265.1 lncRNA downstream 27737 248481 ~ 256886 (+) False LOC122325207
TU12266 lncRNA downstream 28016 248760 ~ 251979 (+) True LOC122325207
TU12308 lncRNA downstream 267036 487780 ~ 515969 (+) True G8207
TU12311 lncRNA downstream 345152 565896 ~ 566914 (+) True G8209
XM_043219950.1 mRNA upstream 35633 171622 ~ 175008 (+) True wu:fi34b01
XM_043219963.1 mRNA downstream 3272 224016 ~ 233410 (+) True LOC122325083
XM_043220121.1 mRNA downstream 17998 238742 ~ 240396 (+) True LOC122325174
XM_043219987.1 mRNA downstream 20707 241451 ~ 244722 (+) True LOC122325097
XM_043261606.1 mRNA downstream 226506 447250 ~ 457745 (+) True LOC122360757
XM_043220006.1 mRNA downstream 339235 559979 ~ 564990 (+) True LOC122325106
TU12245 other downstream 1301 222045 ~ 223043 (+) False G8167
TU12282 other downstream 226418 447162 ~ 450019 (+) False LOC122360757
TU12283 other downstream 226418 447162 ~ 450019 (+) False LOC122360757
TU12491 other downstream 579188 799932 ~ 828209 (+) False st6galnac5a
XR_006252350.1 other downstream 1324029 1544773 ~ 1554114 (+) False rc3h1b

Expression Profile