RNA id: TU12372


Basic Information

Item Value
RNA id TU12372
length 510
RNA type TUCP
GC content 0.35
exon number 5
gene id G8237
representative False

Chromosome Information

Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 142744 ~ 223934 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

CCGCACTGTATTTAAGAAACGCATCACTTGCTTCACAAGCGTGTGCTGTGATGGCGTCTTGGAAAATGCGGGGAAGgttgttgtttttattgagtATTTTAACGTGTATTACTTTAGTACACTGTAGAAGTTTGTCTCAGTTTTCTGGAACGGAAAAAACAAACGATGGACGTGGACGTGGTGATGCTGGAGTCTTGGgcctgtgGAACAAAATGTTCATGAAAGGGCAACTACTCAGTTCCTCTAAAGCAGCCTGGGATGCCATGTCTCCGAAGTTAAGGTGTGGTGACGATCTCATGAGTTTACAACTTGGTGGTCCAGACGTGGCAAACGTTGAACTTTGTCAAGGCAATGGGGTGCCTGTTCCCCTCACTCATCTGCCACCTGACTGTGGTCACACCACACTCACTAACAGAGGTCTTGTCTATGCTACTCCCTATGATGGATGTGGTGTTGCGCAAAAGGGAGGGCATTATGTGATGCAGATACTGTGGCAGGGAAACACTGCAG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU12353 lncRNA downstream 55189 142744 ~ 143439 (-) False G8237
TU12411 lncRNA upstream 67472 291406 ~ 369448 (-) True G8257
XR_006247269.1 lncRNA upstream 174192 398126 ~ 403822 (-) True LOC122325225
TU12432 lncRNA upstream 324100 548034 ~ 551702 (-) True G8273
TU12337 lncRNA upstream 347095 571029 ~ 603940 (-) False LOC122325167
TU12338 lncRNA upstream 347095 571029 ~ 603940 (-) False LOC122325167
XM_043261535.1 mRNA downstream 3270 192500 ~ 195358 (-) True LOC122360711
XM_043220061.1 mRNA upstream 9573 233507 ~ 237593 (-) True LOC122325145
XM_043219896.1 mRNA upstream 70535 294469 ~ 316685 (-) False LOC122325049
XM_043219888.1 mRNA upstream 70535 294469 ~ 316685 (-) True LOC122325049
XM_043220133.1 mRNA upstream 208734 432668 ~ 445573 (-) True LOC122325182
XM_043219876.1 mRNA upstream 244662 468596 ~ 515724 (-) True LOC122325042
TU12374 other downstream 46998 142744 ~ 151630 (-) False G8237
XR_006246996.1 other upstream 956011 1179945 ~ 1202987 (-) False dipk2aa
XR_006247871.1 other upstream 1159774 1383708 ~ 1383784 (-) True LOC122328985
XR_006247866.1 other upstream 1160156 1384090 ~ 1384275 (-) True LOC122328960
XR_006247864.1 other upstream 1160763 1384697 ~ 1384875 (-) True LOC122328955
XR_006247870.1 other upstream 1161163 1385097 ~ 1385166 (-) True LOC122328981

Expression Profile