RNA id: TU12373


Basic Information

Item Value
RNA id TU12373
length 374
lncRNA type sense_over
GC content 0.43
exon number 2
gene id G8237
representative False

Chromosome Information

Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 142744 ~ 223934 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

TGCACAGCCTGTAACCACTACTCCTCAACCCTGTACTACAACTGCAGCTGCTGAATGCTGGCCCTCTGCCAACCAGCCTGATGTGCCACCCCAGCAATATGTACCTCCCAGCTCTGTACTGTATGAAAAATACCCCTTTGCACTTCAATTTGTGGACTTTTTGGACCCCAACTCTTTCCCATGAAGCTGAGGATTGTGGCTAGATGCGTTGAATTAGACTGGTAATGTGCTGTACGTGGCTTTCAAAGATTTGCCTCCTGATTTAATGGTAATCTAAAGTGATTCCTGTTCATGAACATTCTGCGTTTTTTGTCCTGTCTTCAATTGCTAAATAAACTTgatcaaaaaatgtatcattctgtgttttccttttt

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU12353 lncRNA downstream 67166 142744 ~ 143439 (-) False G8237
XR_006247263.1 lncRNA upstream 2513 223256 ~ 223888 (-) True LOC122325194
TU12411 lncRNA upstream 70663 291406 ~ 369448 (-) True G8257
XR_006247269.1 lncRNA upstream 177383 398126 ~ 403822 (-) True LOC122325225
TU12432 lncRNA upstream 327291 548034 ~ 551702 (-) True G8273
TU12337 lncRNA upstream 350286 571029 ~ 603940 (-) False LOC122325167
XM_043261549.1 mRNA downstream 5255 204050 ~ 205350 (-) True LOC122360720
XM_043261535.1 mRNA downstream 15247 192500 ~ 195358 (-) True LOC122360711
XM_043220061.1 mRNA upstream 12764 233507 ~ 237593 (-) True LOC122325145
XM_043219896.1 mRNA upstream 73726 294469 ~ 316685 (-) False LOC122325049
XM_043219888.1 mRNA upstream 73726 294469 ~ 316685 (-) True LOC122325049
XM_043220133.1 mRNA upstream 211925 432668 ~ 445573 (-) True LOC122325182
XM_043219876.1 mRNA upstream 247853 468596 ~ 515724 (-) True LOC122325042
TU12374 other downstream 58975 142744 ~ 151630 (-) False G8237
XR_006246996.1 other upstream 959202 1179945 ~ 1202987 (-) False dipk2aa
XR_006247871.1 other upstream 1162965 1383708 ~ 1383784 (-) True LOC122328985
XR_006247866.1 other upstream 1163347 1384090 ~ 1384275 (-) True LOC122328960
XR_006247864.1 other upstream 1163954 1384697 ~ 1384875 (-) True LOC122328955
XR_006247870.1 other upstream 1164354 1385097 ~ 1385166 (-) True LOC122328981

Expression Profile