RNA id: TU13511



Basic Information


Item Value
RNA id TU13511
length 753
lncRNA type inter_gene
GC content 0.42
exon number 2
gene id G9022
representative True

Chromosome Information


Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 3116848 ~ 3121053 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


ATGTATAGGaaatatataggctacatatattattattattgtcttttaaatgttttacttgcTTTGTCGTTAATGCTGTATTATAGCGTTTCAGTCAAACAAAAAAGAGCAAATGGACATGTTTACAGAAGTTATATATGTTATCGTAAgaacgtgtgcgtgtgtgtctttgtgttagGTGTGTGTCTTTCGCGTGTCTCGCTTGTGAACCTTTGACCTTTAAAACAGTTGAGTCGGCTTTGAGCGTTTCCCTTTCAACGCGAGAGAGGAAAAAGCTTTTAACTAAAAATTTCCCtagttaatttaaataaacgtCCAAAGGTGAAGCGTTTGAAACGGATTTCCGGGTTTCAGGAGAAGACTTCTTTACCTTCCCGCTCAGCACAGACAGGTTCTCCGCTCCTTCGATGTGAAGAACTTGAGTGGACTGATCGTTCTGGTTCAGGTAGCTCTTGAGCCGGATGAAGTCCACCCTCATGGGCAGGGTCTTGTTGGAGTTTCGGCACAGGACTTTGACGCGGTCCACCAGGTCAGCGCAGAACTGATAGCCTCCCTTCAGCACACACAGCACCACGATGTCATGATCACCGAGATCATCCATGATATTTCTGGCCAGCCTCTCTGTCCTGGAAAACCCCACGACGGCACAACAAAGTCTGACTGTTTGTAGAGTGCACTTTCAAGTACACTCTATGGAAAGGATAATgtatgaaagcaaaaataaagtaataatttgtttaaatggaaaaaaaa

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU13209 lncRNA upstream 204061 2912291 ~ 2912787 (+) True G8816
TU13183 lncRNA upstream 244099 2819072 ~ 2872749 (+) False G8794
TU13185 lncRNA upstream 255742 2819072 ~ 2861106 (+) True G8794
TU13184 lncRNA upstream 260439 2819072 ~ 2856409 (+) False G8794
TU13130 lncRNA upstream 446905 2638542 ~ 2669943 (+) False LOC122355548
TU13515 lncRNA downstream 35547 3156600 ~ 3164823 (+) False gpr158b
TU13665 lncRNA downstream 402217 3523270 ~ 3524571 (+) True G9130
TU13692 lncRNA downstream 442655 3563708 ~ 3564239 (+) True G9141
TU13693 lncRNA downstream 451384 3572437 ~ 3573075 (+) True G9142
TU13801 lncRNA downstream 659487 3780540 ~ 3780778 (+) True G9232
XM_043222200.1 mRNA upstream 52246 2955709 ~ 3064602 (+) False dpp6b
XM_043222186.1 mRNA upstream 52246 2970218 ~ 3064602 (+) False dpp6b
XM_043222193.1 mRNA upstream 52246 2977772 ~ 3064602 (+) True dpp6b
XM_043222206.1 mRNA upstream 52246 3013120 ~ 3064602 (+) False dpp6b
XM_043260587.1 mRNA upstream 336170 2742715 ~ 2780678 (+) True bcl2b
XM_043261211.1 mRNA downstream 2071 3123124 ~ 3163198 (+) True gpr158b
XM_043254300.1 mRNA downstream 49398 3170451 ~ 3190588 (+) True kcnt2
XM_043254309.1 mRNA downstream 72959 3194012 ~ 3197447 (+) True LOC122355741
XM_043263882.1 mRNA downstream 88099 3209152 ~ 3213666 (+) True LOC122362414
XM_043217297.1 mRNA downstream 114181 3235234 ~ 3253124 (+) True abhd3
XR_006252450.1 other upstream 376941 2729636 ~ 2739907 (+) False kdsr
XR_006252354.1 other upstream 427221 2675370 ~ 2689627 (+) False LOC122356587
TU13150 other upstream 480262 2635241 ~ 2636586 (+) False G8768
TU13151 other upstream 480262 2635241 ~ 2636586 (+) True G8768
XR_006247877.1 other upstream 498399 2618316 ~ 2618449 (+) True LOC122329004
TU13709 other downstream 494429 3615482 ~ 3617043 (+) True G9154
TU13731 other downstream 555372 3676425 ~ 3678934 (+) True G9173
TU14011 other downstream 1101186 4222239 ~ 4223112 (+) True G9361
TU14081 other downstream 1442844 4563897 ~ 4570094 (+) False G9416
XR_006247003.1 other downstream 1458221 4579274 ~ 4588478 (+) True mylk4a

Expression Profile