RNA id: TU13665



Basic Information


Item Value
RNA id TU13665
length 865
lncRNA type inter_gene
GC content 0.40
exon number 2
gene id G9130
representative True

Chromosome Information


Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 3523270 ~ 3524571 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


caaaaaaaaaaaaaaaaaaaaaaaaaaaaaaatatatatatatatatatatatattttttttttttttttttTGCAGTGgtaaaacactttctttttattcCAGGAAATAGTCtctattaaagaaatattaaagctCTCCGCTGATTCTAGTACttgtattaaattaacatttttaacaacaatcaagctttttttttcacaagcttAAGATCATGagaaacaaacatacaaagtGCAAAATGTAACAAATCACCGTGAAATGAAAGGCAAATGTGAAACAGGACTCAAAGGAAGCAAGCTGCTGGCTAATATTCACATCAGCAACACTGAgatgattatgatgatgatgaactgAGTGGCTTACTGAAGCAGGCCGTGAATCTTCTGGTTGTTTGCTGGTTAGAAGTGCTTttacacaaatgtttaaattgctCATGATCTCACAGTGTCGCAAGAGTggtgtaaaaacataaaaagactCACCTTGACACTCACTTCCTAAACAAGCCTCACCAAACACACAGGCTAACATATGAGAGCGATATCCGTGTTCCTCACTCGGTTAAAAAGGATAATAAATTAGACACTGTAAAATCAGTCTGAGCGTGGAGTGATATGTTGCTGGGTGTGAATATGTGGCCTATCAGAGCACAGCTACACCTCCATCACAGCGGCTGGTGATCATGTTGCCGATCTCCGTCCACGTGTCCAGGTGGGGGTCATAGATTTCCACCGAGTCTACAGTGACCGGTGCTGAAAAGTCCCGGCTAGAGGTTCGACCTCCCACTGCGTACAACAAACCATTGACAGCCGCCACTGTTACCCCGGCTCGCGGGACGCCCATCGGTGCCACCTCCACCCACT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU13515 lncRNA upstream 358447 3156600 ~ 3164823 (+) False gpr158b
TU13511 lncRNA upstream 402217 3116848 ~ 3121053 (+) True G9022
TU13209 lncRNA upstream 610483 2912291 ~ 2912787 (+) True G8816
TU13183 lncRNA upstream 650521 2819072 ~ 2872749 (+) False G8794
TU13692 lncRNA downstream 39137 3563708 ~ 3564239 (+) True G9141
TU13693 lncRNA downstream 47866 3572437 ~ 3573075 (+) True G9142
TU13801 lncRNA downstream 255969 3780540 ~ 3780778 (+) True G9232
TU13803 lncRNA downstream 259768 3784339 ~ 3784667 (+) True G9234
TU13804 lncRNA downstream 260346 3784917 ~ 3785295 (+) True G9235
XM_043260808.1 mRNA upstream 494 3512889 ~ 3522776 (+) False guk1a
XM_043260785.1 mRNA upstream 494 3512893 ~ 3522776 (+) False guk1a
XM_043260765.1 mRNA upstream 494 3514445 ~ 3522776 (+) False guk1a
XM_043260776.1 mRNA upstream 494 3514445 ~ 3522776 (+) False guk1a
XM_043260801.1 mRNA upstream 494 3516912 ~ 3522776 (+) True guk1a
XM_043253654.1 mRNA downstream 25664 3550235 ~ 3562870 (+) True zyg11l
XM_043253664.1 mRNA downstream 25664 3550235 ~ 3562870 (+) False zyg11l
XM_043253680.1 mRNA downstream 25664 3550235 ~ 3562870 (+) False zyg11l
XM_043253673.1 mRNA downstream 25664 3550235 ~ 3562507 (+) False zyg11l
XM_043261096.1 mRNA downstream 51085 3575656 ~ 3584040 (+) True serbp1b
XR_006252450.1 other upstream 783363 2729636 ~ 2739907 (+) False kdsr
XR_006252354.1 other upstream 833643 2675370 ~ 2689627 (+) False LOC122356587
TU13150 other upstream 886684 2635241 ~ 2636586 (+) False G8768
TU13151 other upstream 886684 2635241 ~ 2636586 (+) True G8768
XR_006247877.1 other upstream 904821 2618316 ~ 2618449 (+) True LOC122329004
TU13709 other downstream 90911 3615482 ~ 3617043 (+) True G9154
TU13731 other downstream 151854 3676425 ~ 3678934 (+) True G9173
TU14011 other downstream 697668 4222239 ~ 4223112 (+) True G9361
TU14081 other downstream 1039326 4563897 ~ 4570094 (+) False G9416
XR_006247003.1 other downstream 1054703 4579274 ~ 4588478 (+) True mylk4a

Expression Profile