Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU14080 |
| length | 753 |
| lncRNA type | inter_gene |
| GC content | 0.54 |
| exon number | 2 |
| gene id | G9416 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_056700.1 |
| NCBI id | CM032069.1 |
| chromosome length | 25613461 |
| location | 4563897 ~ 4570094 (+) |
| genome version | ASM1883169v1_2021_tiger_barb_Genome |
| species | tiger barb (Puntius tetrazona) |
| id | name | namespace |
|---|---|---|
| GO:0044085 | cellular component biogenesis | biological_process |
| GO:0042692 | muscle cell differentiation | biological_process |
| GO:0048468 | cell development | biological_process |
| GO:0022607 | cellular component assembly | biological_process |
| GO:0051146 | striated muscle cell differentiation | biological_process |
| GO:0071840 | cellular component organization or biogenesis | biological_process |
| GO:0010927 | cellular component assembly involved in morphogenesis | biological_process |
| GO:0055001 | muscle cell development | biological_process |
| GO:0055002 | striated muscle cell development | biological_process |
| GO:0014866 | skeletal myofibril assembly | biological_process |
| GO:0031032 | actomyosin structure organization | biological_process |
| GO:0006996 | organelle organization | biological_process |
| GO:0007010 | cytoskeleton organization | biological_process |
| GO:0097435 | supramolecular fiber organization | biological_process |
| GO:0030239 | myofibril assembly | biological_process |
| GO:0032989 | cellular component morphogenesis | biological_process |
| GO:0070925 | organelle assembly | biological_process |
| GO:0030029 | actin filament-based process | biological_process |
| GO:0030036 | actin cytoskeleton organization | biological_process |
| GO:0061061 | muscle structure development | biological_process |
| GO:0016043 | cellular component organization | biological_process |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU14059 | lncRNA | upstream | 47988 | 4478309 ~ 4520645 (+) | True | G9397 |
| TU14060 | lncRNA | upstream | 86009 | 4479477 ~ 4482624 (+) | True | G9398 |
| TU14051 | lncRNA | upstream | 105791 | 4461116 ~ 4462842 (+) | True | G9391 |
| TU14052 | lncRNA | upstream | 106566 | 4459093 ~ 4462067 (+) | False | G9391 |
| TU14039 | lncRNA | upstream | 181189 | 4386927 ~ 4387444 (+) | True | G9382 |
| TU14214 | lncRNA | downstream | 54668 | 4624762 ~ 4627170 (+) | True | G9516 |
| TU14236 | lncRNA | downstream | 83862 | 4653956 ~ 4654170 (+) | True | G9536 |
| TU14252 | lncRNA | downstream | 216952 | 4787046 ~ 4787369 (+) | True | G9550 |
| TU14285 | lncRNA | downstream | 342901 | 4912995 ~ 4913362 (+) | True | G9568 |
| TU14327 | lncRNA | downstream | 504755 | 5074849 ~ 5111570 (+) | True | G9596 |
| XM_043264143.1 | mRNA | upstream | 19030 | 4540052 ~ 4549603 (+) | True | si:ch211-241e1.3 |
| XM_043218010.1 | mRNA | upstream | 135914 | 4423377 ~ 4432719 (+) | True | LOC122323895 |
| XM_043217998.1 | mRNA | upstream | 146466 | 4415924 ~ 4422167 (+) | True | LOC122323886 |
| XM_043217986.1 | mRNA | upstream | 152833 | 4403781 ~ 4415800 (+) | True | LOC122323876 |
| XM_043261495.1 | mRNA | upstream | 191636 | 4305769 ~ 4376997 (+) | True | LOC122360677 |
| XM_043217242.1 | mRNA | downstream | 2851 | 4572945 ~ 4589827 (+) | False | mylk4a |
| XM_043217223.1 | mRNA | downstream | 10391 | 4580485 ~ 4589827 (+) | False | mylk4a |
| XM_043217230.1 | mRNA | downstream | 10393 | 4580487 ~ 4589827 (+) | False | mylk4a |
| XM_043223980.1 | mRNA | downstream | 314516 | 4884610 ~ 4885965 (+) | True | LOC122328338 |
| XM_043223961.1 | mRNA | downstream | 318029 | 4888123 ~ 4891761 (+) | True | foxf2a |
| TU14011 | other | upstream | 345521 | 4222239 ~ 4223112 (+) | True | G9361 |
| TU13731 | other | upstream | 889699 | 3676425 ~ 3678934 (+) | True | G9173 |
| TU13709 | other | upstream | 951590 | 3615482 ~ 3617043 (+) | True | G9154 |
| XR_006252450.1 | other | upstream | 1828726 | 2729636 ~ 2739907 (+) | False | kdsr |
| XR_006252354.1 | other | upstream | 1879006 | 2675370 ~ 2689627 (+) | False | LOC122356587 |
| XR_006247003.1 | other | downstream | 9180 | 4579274 ~ 4588478 (+) | True | mylk4a |
| TU14280 | other | downstream | 328304 | 4898398 ~ 4899286 (+) | False | LOC122361055 |
| TU14284 | other | downstream | 339035 | 4909129 ~ 4909798 (+) | False | LOC122355892 |
| TU14282 | other | downstream | 339042 | 4909136 ~ 4909798 (+) | False | LOC122355892 |
| TU14373 | other | downstream | 1038233 | 5608327 ~ 5609276 (+) | True | G9630 |
