RNA id: TU14081



Basic Information


Item Value
RNA id TU14081
length 452
RNA type TUCP
GC content 0.36
exon number 2
gene id G9416
representative False

Chromosome Information


Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 4563897 ~ 4570094 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


AGCAGACCTCTGAAGCATCCCCGCTCAGCACCTGCAGTCCCAGGAAGTCTACAGCCCGGCGCAGGATCGAGGCCATCGCTTCCACCGACAGACGTTCCAGAACCAGAACCCTGCAGCGGCTCAGAAGAGCACTGTTGACCTGGAAGGACGGGTTCTCTGTGGTGGCGCCGATAAGAGTGATCGTCCCGCACTCCACGTGAGGCAAGAAGGTGTCCTGAGAGCAGAACAGAGACATGGGAGGACAAGAGAAGACACCATACACTCCACAAGAGCAGACATATCAGAGCTGTGGAAGCCACGAGAGGCCAGTGCTTGACCTGAGCCTGTTCAGAAACCCAGAGACTCCTGACGAATCTCCTCGAGTCAAACAGGCCAGACCGAAGGCTGTGCATCGCTGCTCTGGAAGCATCTTTCTGGGCAAACTGGCCTTGTCCCACTATCTGGACAGAGTC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU14059 lncRNA upstream 43252 4478309 ~ 4520645 (+) True G9397
TU14060 lncRNA upstream 81273 4479477 ~ 4482624 (+) True G9398
TU14051 lncRNA upstream 101055 4461116 ~ 4462842 (+) True G9391
TU14052 lncRNA upstream 101830 4459093 ~ 4462067 (+) False G9391
TU14039 lncRNA upstream 176453 4386927 ~ 4387444 (+) True G9382
TU14214 lncRNA downstream 54668 4624762 ~ 4627170 (+) True G9516
TU14236 lncRNA downstream 83862 4653956 ~ 4654170 (+) True G9536
TU14252 lncRNA downstream 216952 4787046 ~ 4787369 (+) True G9550
TU14285 lncRNA downstream 342901 4912995 ~ 4913362 (+) True G9568
TU14327 lncRNA downstream 504755 5074849 ~ 5111570 (+) True G9596
XM_043264143.1 mRNA upstream 14294 4540052 ~ 4549603 (+) True si:ch211-241e1.3
XM_043218010.1 mRNA upstream 131178 4423377 ~ 4432719 (+) True LOC122323895
XM_043217998.1 mRNA upstream 141730 4415924 ~ 4422167 (+) True LOC122323886
XM_043217986.1 mRNA upstream 148097 4403781 ~ 4415800 (+) True LOC122323876
XM_043261508.1 mRNA upstream 186900 4305601 ~ 4376997 (+) False LOC122360677
XM_043217242.1 mRNA downstream 2851 4572945 ~ 4589827 (+) False mylk4a
XM_043217223.1 mRNA downstream 10391 4580485 ~ 4589827 (+) False mylk4a
XM_043217230.1 mRNA downstream 10393 4580487 ~ 4589827 (+) False mylk4a
XM_043223980.1 mRNA downstream 314516 4884610 ~ 4885965 (+) True LOC122328338
XM_043223961.1 mRNA downstream 318029 4888123 ~ 4891761 (+) True foxf2a
TU14011 other upstream 340785 4222239 ~ 4223112 (+) True G9361
TU13731 other upstream 884963 3676425 ~ 3678934 (+) True G9173
TU13709 other upstream 946854 3615482 ~ 3617043 (+) True G9154
XR_006252450.1 other upstream 1823990 2729636 ~ 2739907 (+) False kdsr
XR_006252354.1 other upstream 1874270 2675370 ~ 2689627 (+) False LOC122356587
XR_006247003.1 other downstream 9180 4579274 ~ 4588478 (+) True mylk4a
TU14280 other downstream 328304 4898398 ~ 4899286 (+) False LOC122361055
TU14284 other downstream 339035 4909129 ~ 4909798 (+) False LOC122355892
TU14282 other downstream 339042 4909136 ~ 4909798 (+) False LOC122355892
TU14373 other downstream 1038233 5608327 ~ 5609276 (+) True G9630

Expression Profile