RNA id: XM_043218780.1


Basic Information

Item Value
RNA id XM_043218780.1
length 1348
RNA type mRNA
GC content 0.48
exon number 7
gene id ahsg2
representative True

Chromosome Information

Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 2658403 ~ 2661029 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

atatatatatacgcagcAAACCGAACCTGGTCACCTTCTGTCCGCACATAGGCTTCAGGAGTTGAGGTTGTCGTTCAGCATGCAGCTCTGCGCTTTGCTCACTGTTCTCGGGCTCCTGGTAACAGGGTCACGGGCTCAGGGCTTGATGCCCACCGTCAGCTTGCCTCCCTGTGATTCCCCCGAAGCTGAAGCAGCGGCTCTGGCGGCGCAGGGTTTCCTCAACGCTCAGCACACACACGGTTACAAATACGTCCTAAATCAGATCGACGAAATCAAGGTCGTCTCCAGGCCGCTTCAAGCAGACACGTATCATCTGGAACTAGATTTTCTTGAAACTACGTGTCACGTCTTGGATCCAACCCCTGTGAGCCTTTGTCCAGTCAGACAAAAAATTAATACGGCGGTTGAGGCAGATTGTGATTTTGTACTTGCGAATACAACTCTAGGTTTTTCTGTTGTGGCATTCAAGTGTAAAACTGAGACAGAATCAGAGGATGAATGCCTGGGCTGCCCTCAACTCGTTGCTTTAAATGACACTGACGGACTCCAACTCATTCAAACCTCTTTAGactatttcaataaaaataatactctAAATACAAAGTTTGCACTCCTTGAAATCGGACGCATGGGATCCCAGattgTGAGTGGCGGAGCCAGGTACTTTGCAGAATACGCCATTATTGGGACTAACTGCACAAGTCAAGATAACGATATATGCATCCCTCAGAATCACACTGTTGCTATCCATGGCCTCTGTCTAGCTGCGGGTTCTGCCGATGGTGTTGACTGCAAAATCTTTGCCTCAACCCAAGCGAGCAACGCCACAGTGCGAGTGCAACAGCTTCTGCATGCACACACCTTTGGACCTCAGCACAACCCTGCCATTCACGACCTCAAACATCACAAGCTGACAGCACTCCACGACCCTTCAGCAAGTGGTCTGCTCTCTGCAGAATCCATTGAAGTGGCTGTGGCAGCGCCAGTGGCAGCGGCAGCACCAAAGGAAGCTCCTATCGTAAAGAGGCAGGTCGCTCCGCAGGAAGTGCCAGCAGTAGATGCAACAGTGTCAGAAAAAGCGACCCTTCTATCAGGGCCCGTTCAACTTGTTCCCATTTGTCCAgggaaaaagaaacatttctgacctAGTCACATTTCACGAGCCGACCCAAATGTTAACTCGCCTTGATGAGTTCTGAGATTGCCACCAAACTCTTAAGTGTTGTCGTTCTggactaaatgttttataacaaaGCAGGTACATGTATGAACAAAACTAGCCTTCTTGTTGCAGAAGCAGTCAAGGCTGTGCCTGTGTtgtactgtaataaaatgtttaccagtctaa

Function

GO: NA

KEGG:

id description
K23409 AHSG, FETUA; alpha-2-HS-glycoprotein

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU13127 lncRNA upstream 39046 2617268 ~ 2619357 (+) False LOC122355548
XR_006252229.1 lncRNA upstream 39525 2617207 ~ 2618878 (+) False LOC122355548
TU13145 lncRNA upstream 45299 2612522 ~ 2613104 (+) True G8764
TU13085 lncRNA upstream 48884 2511622 ~ 2609519 (+) True G8724
TU13102 lncRNA upstream 213203 2443588 ~ 2445200 (+) True G8737
TU13183 lncRNA downstream 158043 2819072 ~ 2872749 (+) False G8794
TU13184 lncRNA downstream 158043 2819072 ~ 2856409 (+) False G8794
TU13185 lncRNA downstream 158043 2819072 ~ 2861106 (+) True G8794
TU13209 lncRNA downstream 251262 2912291 ~ 2912787 (+) True G8816
TU13511 lncRNA downstream 455819 3116848 ~ 3121053 (+) True G9022
XM_043224252.1 mRNA upstream 618 2644995 ~ 2657785 (+) False LOC122328513
XM_043224241.1 mRNA upstream 618 2645117 ~ 2657785 (+) True LOC122328513
XM_043220789.1 mRNA upstream 25847 2620842 ~ 2632556 (+) True dvl3a
XM_043253930.1 mRNA upstream 51547 2598768 ~ 2606856 (+) True ap2m1a
XM_043253949.1 mRNA upstream 51547 2598768 ~ 2606856 (+) False ap2m1a
XM_043255474.1 mRNA downstream 14341 2675370 ~ 2689627 (+) True LOC122356587
XM_043255488.1 mRNA downstream 14343 2675372 ~ 2689627 (+) False LOC122356587
XM_043217897.1 mRNA downstream 34392 2695421 ~ 2701972 (+) True LOC122323799
XM_043256604.1 mRNA downstream 56544 2717573 ~ 2729493 (+) True vps4b
XM_043256611.1 mRNA downstream 61182 2722211 ~ 2729493 (+) False vps4b
TU13150 other upstream 21817 2635241 ~ 2636586 (+) False G8768
TU13151 other upstream 21817 2635241 ~ 2636586 (+) True G8768
XR_006247877.1 other upstream 39954 2618316 ~ 2618449 (+) True LOC122329004
XR_006247876.1 other upstream 40269 2618002 ~ 2618134 (+) True LOC122328998
TU13140 other upstream 65645 2591634 ~ 2592758 (+) True G8760
XR_006252354.1 other downstream 14341 2675370 ~ 2689627 (+) False LOC122356587
XR_006252450.1 other downstream 68607 2729636 ~ 2739907 (+) False kdsr
TU13709 other downstream 954453 3615482 ~ 3617043 (+) True G9154
TU13731 other downstream 1015396 3676425 ~ 3678934 (+) True G9173
TU14011 other downstream 1561210 4222239 ~ 4223112 (+) True G9361

Expression Profile