Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_043223980.1 |
| length | 1356 |
| RNA type | mRNA |
| GC content | 0.58 |
| exon number | 1 |
| gene id | LOC122328338 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_056700.1 |
| NCBI id | CM032069.1 |
| chromosome length | 25613461 |
| location | 4884610 ~ 4885965 (+) |
| genome version | ASM1883169v1_2021_tiger_barb_Genome |
| species | tiger barb (Puntius tetrazona) |
| id | name | namespace |
|---|---|---|
| GO:0009888 | tissue development | biological_process |
| GO:0000122 | negative regulation of transcription by RNA polymerase II | biological_process |
| GO:0009410 | response to xenobiotic stimulus | biological_process |
| GO:0007389 | pattern specification process | biological_process |
| GO:0051090 | regulation of DNA-binding transcription factor activity | biological_process |
| GO:0009790 | embryo development | biological_process |
| GO:0005634 | nucleus | cellular_component |
| GO:0005667 | transcription regulator complex | cellular_component |
| GO:0043565 | sequence-specific DNA binding | molecular_function |
| GO:0008134 | transcription factor binding | molecular_function |
| GO:0003690 | double-stranded DNA binding | molecular_function |
| GO:0008301 | DNA binding, bending | molecular_function |
| id | description |
|---|---|
| K09410 | FOXQ, HFH1; forkhead box protein Q |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU14252 | lncRNA | upstream | 97241 | 4787046 ~ 4787369 (+) | True | G9550 |
| TU14236 | lncRNA | upstream | 230440 | 4653956 ~ 4654170 (+) | True | G9536 |
| TU14214 | lncRNA | upstream | 257440 | 4624762 ~ 4627170 (+) | True | G9516 |
| TU14080 | lncRNA | upstream | 314516 | 4568633 ~ 4570094 (+) | True | G9416 |
| TU14059 | lncRNA | upstream | 363965 | 4478309 ~ 4520645 (+) | True | G9397 |
| TU14285 | lncRNA | downstream | 27030 | 4912995 ~ 4913362 (+) | True | G9568 |
| TU14327 | lncRNA | downstream | 188884 | 5074849 ~ 5111570 (+) | True | G9596 |
| TU14347 | lncRNA | downstream | 557569 | 5443534 ~ 5537078 (+) | False | G9613 |
| TU14350 | lncRNA | downstream | 557569 | 5443534 ~ 5537567 (+) | True | G9613 |
| TU14345 | lncRNA | downstream | 557643 | 5443608 ~ 5537078 (+) | False | G9613 |
| XM_043217242.1 | mRNA | upstream | 294783 | 4572945 ~ 4589827 (+) | False | mylk4a |
| XM_043217223.1 | mRNA | upstream | 294783 | 4580485 ~ 4589827 (+) | False | mylk4a |
| XM_043217230.1 | mRNA | upstream | 294783 | 4580487 ~ 4589827 (+) | False | mylk4a |
| XM_043264143.1 | mRNA | upstream | 335007 | 4540052 ~ 4549603 (+) | True | si:ch211-241e1.3 |
| XM_043218010.1 | mRNA | upstream | 451891 | 4423377 ~ 4432719 (+) | True | LOC122323895 |
| XM_043223961.1 | mRNA | downstream | 2158 | 4888123 ~ 4891761 (+) | True | foxf2a |
| XM_043223968.1 | mRNA | downstream | 2162 | 4888127 ~ 4891761 (+) | False | foxf2a |
| XM_043261999.1 | mRNA | downstream | 12407 | 4898372 ~ 4899380 (+) | True | LOC122361055 |
| XM_043254486.1 | mRNA | downstream | 23168 | 4909133 ~ 4911176 (+) | True | LOC122355892 |
| XM_043223281.1 | mRNA | downstream | 844640 | 5730605 ~ 5763859 (+) | False | pex5lb |
| XR_006247003.1 | other | upstream | 296132 | 4579274 ~ 4588478 (+) | True | mylk4a |
| TU14081 | other | upstream | 314516 | 4563897 ~ 4570094 (+) | False | G9416 |
| TU14011 | other | upstream | 661498 | 4222239 ~ 4223112 (+) | True | G9361 |
| TU13731 | other | upstream | 1205676 | 3676425 ~ 3678934 (+) | True | G9173 |
| TU13709 | other | upstream | 1267567 | 3615482 ~ 3617043 (+) | True | G9154 |
| TU14280 | other | downstream | 12433 | 4898398 ~ 4899286 (+) | False | LOC122361055 |
| TU14284 | other | downstream | 23164 | 4909129 ~ 4909798 (+) | False | LOC122355892 |
| TU14282 | other | downstream | 23171 | 4909136 ~ 4909798 (+) | False | LOC122355892 |
| TU14373 | other | downstream | 722362 | 5608327 ~ 5609276 (+) | True | G9630 |
| TU14467 | other | downstream | 938028 | 5823993 ~ 5826286 (+) | False | dusp28 |
