Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_043258550.1 |
| length | 1441 |
| RNA type | mRNA |
| GC content | 0.48 |
| exon number | 7 |
| gene id | LOC122358704 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_056700.1 |
| NCBI id | CM032069.1 |
| chromosome length | 25613461 |
| location | 2427557 ~ 2431457 (+) |
| genome version | ASM1883169v1_2021_tiger_barb_Genome |
| species | tiger barb (Puntius tetrazona) |
| id | name | namespace |
|---|---|---|
| GO:0006165 | nucleoside diphosphate phosphorylation | biological_process |
| GO:0009142 | nucleoside triphosphate biosynthetic process | biological_process |
| GO:0006221 | pyrimidine nucleotide biosynthetic process | biological_process |
| GO:0005634 | nucleus | cellular_component |
| GO:0005737 | cytoplasm | cellular_component |
| GO:0005524 | ATP binding | molecular_function |
| GO:0004550 | nucleoside diphosphate kinase activity | molecular_function |
| id | description |
|---|---|
| K13800 | CMPK1, UMPK; UMP-CMP kinase |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU13075 | lncRNA | upstream | 106370 | 2288286 ~ 2321187 (+) | True | G8716 |
| TU13076 | lncRNA | upstream | 137517 | 2288825 ~ 2290040 (+) | True | G8717 |
| TU13062 | lncRNA | upstream | 139341 | 2287346 ~ 2288216 (+) | False | sgip1b |
| TU13050 | lncRNA | upstream | 173966 | 2249222 ~ 2253591 (+) | True | G8703 |
| TU13054 | lncRNA | upstream | 200306 | 2226905 ~ 2227251 (+) | True | G8707 |
| TU13102 | lncRNA | downstream | 12131 | 2443588 ~ 2445200 (+) | True | G8737 |
| TU13085 | lncRNA | downstream | 80165 | 2511622 ~ 2609519 (+) | True | G8724 |
| TU13145 | lncRNA | downstream | 181065 | 2612522 ~ 2613104 (+) | True | G8764 |
| XR_006252229.1 | lncRNA | downstream | 185750 | 2617207 ~ 2618878 (+) | False | LOC122355548 |
| TU13126 | lncRNA | downstream | 185811 | 2617268 ~ 2669597 (+) | True | LOC122355548 |
| XM_043258526.1 | mRNA | upstream | 7602 | 2406742 ~ 2419955 (+) | False | LOC122358652 |
| XM_043258523.1 | mRNA | upstream | 7602 | 2411169 ~ 2419955 (+) | True | LOC122358652 |
| XM_043258628.1 | mRNA | upstream | 36105 | 2390878 ~ 2391452 (+) | True | LOC122358767 |
| XM_043258538.1 | mRNA | upstream | 100114 | 2322711 ~ 2327443 (+) | True | LOC122358683 |
| XM_043224306.1 | mRNA | upstream | 111454 | 2309537 ~ 2316103 (+) | True | bcl6ab |
| XM_043261741.1 | mRNA | downstream | 22393 | 2453850 ~ 2461222 (+) | True | LOC122360901 |
| XM_043261780.1 | mRNA | downstream | 64486 | 2495943 ~ 2510010 (+) | True | LOC122360938 |
| XM_043254791.1 | mRNA | downstream | 110458 | 2541915 ~ 2544563 (+) | True | imp3 |
| XM_043254814.1 | mRNA | downstream | 116609 | 2548066 ~ 2554174 (+) | False | zgc:55943 |
| XM_043254822.1 | mRNA | downstream | 118829 | 2550286 ~ 2554174 (+) | False | zgc:55943 |
| XR_006252635.1 | other | upstream | 7602 | 2411165 ~ 2419955 (+) | False | LOC122358652 |
| TU13086 | other | upstream | 25812 | 2398954 ~ 2401745 (+) | True | G8725 |
| TU13065 | other | upstream | 152422 | 2270681 ~ 2275135 (+) | False | sgip1b |
| XR_006252584.1 | other | upstream | 238192 | 2178766 ~ 2189365 (+) | True | LOC122358138 |
| XR_006252583.1 | other | upstream | 238192 | 2178766 ~ 2189365 (+) | False | LOC122358138 |
| TU13121 | other | downstream | 116656 | 2548113 ~ 2555321 (+) | False | zgc:55943 |
| TU13123 | other | downstream | 118435 | 2549892 ~ 2555321 (+) | False | zgc:55943 |
| TU13124 | other | downstream | 118435 | 2549892 ~ 2555321 (+) | True | zgc:55943 |
| TU13140 | other | downstream | 160177 | 2591634 ~ 2592758 (+) | True | G8760 |
| TU13128 | other | downstream | 185811 | 2617268 ~ 2669943 (+) | False | LOC122355548 |
