RNA id: XM_043260737.1


Basic Information

Item Value
RNA id XM_043260737.1
length 2829
RNA type mRNA
GC content 0.44
exon number 10
gene id prkacbb
representative False

Chromosome Information

Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 4160156 ~ 4171747 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

ACTTAATAACTCGTGCACGTGCCGTCCAGAGGCTGTTCTCCTTCGTGTCCAGCAGGGGGCAGTATGAAGCCTCCTTCTGCTCGCGACCGCCATGTCTCTCCCGCAGCAGAGGAAGATTAGTCTCAGCGAGTGAAGAGCGCTGTGAGAAAGTCAAGGGACTCCGCGCTCACCGTGGCGGAGCAGACCAGAGCTCGCAGGACCAACGCCGCCGAGGGATCCGTCCCGCCGCCGATTCCCCGGGCCGTAGACCGTCGAGTCGATCCGTGAGACAGGGCCGAGGCGCGGAGATCCGGAAGCCTCCTCCAAGGACTCGCCGTCGTCTGTAGCGCCGCGGAGAATCGCGCATTATGGGAAACGCAGCTACTGCCAAGAAAGGCAACGAACTGGAGAGCGTGAAAGAGTTTCTAGCCAAAGCCAAAGAAGAGTTCTTGAGAAAATGGGAATCGCCAccacagAGCACAACTGGTTTAGATGACTTCGACAGACTGAAGACGCTGGGCACGGGCTCTTTCGGGAGAGTCATGCTGGTCAAACACAAGGCCACAGATCAGTTCTATGCCATGAAGATTCTGGACAAACAAAAGGTGGTGAAGTTGAAACAAGTGGAGCATACGCTAAATGAGAAGAGAATATTACAAGCAGTATCCTTCCCGTTCCTCGTCAGATTGGAATACGCCTTTAAGGACAACTCTAACTTGTATATGGTGATGGAGTATGTACCAGGAGGAGAGATGTTCTCACATCTTAGAAGAATCGGAAGGTTTAGTGAACCACACGCACGGTTTTATGCTGCACAGATTGTCCTGACCTTTGAGTACCTCCACTCGCTAGACCTCATCTACAGAGACCTGAAACCTGAAAACCTACTCATTGACCAGCATGGATATATACAGGTAACAGACTTTGGTTTTGCAAAAAGAGTAAAAGGCAGAACCTGGACTTTATGTGGGACTCCAGAGTACTTGGCACCGGAGATCATCCTCAGCAAGGGATACAACAAGGCCGTGGACTGGTGGGCCCTTGGCGTTCTCATTTATGAAATGGCAGCTGGATACCCCCAATTTTTTGCAGACCAGCCTATTCAGATCTATGAGAAAATTGTGTCTGGAAAGgtacgATTCCCCTCGCACTTCAGTTCTGATCTGAAAGATCTGTTGAGGAATCTGCTGCAGGTGGACCTGACCAAACGCTACGGCAACCTGAGGAATGGAGTCAATGATATCAAAAACCACAAATGGTTTGCCACGACGGATTGGATAGCCATCTATGAGAGAAAGGTGGAGGCGCCGTTCATACCAAAGTGCCGAGGTCCTGGAGACACGAGCAACTTTGACGACTACGAAGAGGAAGACATTCGTGTATCTGTTACAGAAAAATGCGCAAAGGAGTTCTCCGAGTTTTAGTTACGGACACATCAAAGCTagacacatatgcatatatatatacatatatttacttatctatatgtatatgtgtgtgtgtgtgtgtgtgtgtgtgtgagtgcatcaCACAACACGTTCAAATAAGGGTATCTTTGCACTCTAAAGACATGGGATGAGCAGAGAGCACATCACCGTCAGAGTTCTTGTGTACTTCCTTCATTCCATTGGGCTTTAGAGGTCACCGGGGTTCTCATGCTCTTACCCATCATGCACCGGCACATCTCCTGCTCCTTCAGTTCACTCTCTTCTTGCTCCGTTTCGCTTCGTCACATGAGCCGTTCGACTTCGTGTTCcccatttaaaagcttttttttggcATTACAAATACGGACTCCGAGgggaaacacacaaacacaaacacaaacgcCAGTTCAGCATTGTTACTCCATGTTTATTTTCGGTGGCGGCGTCATACAGTGTTGCTGTTTAAAAGGTAATTATTGGCATTTTTGGTGTTACACGTCCATGtcgtttttaatttcttttcaccTTTAGACCAAAACAACTgacagcttttcttttcttcttttttttttggttacgtGTGCAAACCTgtcaaatagatttttatttaaaccacaTTGTGTGTTGAAAGCATGACCAAAACCATCGTGTTGTGAACGGCAGAGGAGGAGGTCTTAACTCTTGAGGTTTGCCTTAGAAACTCGGATGTTACGGAGCCCACAGAGTGATCGCATTACAGATGTTACAGTGATCTTTACATCACGATGTTACGGTGAAGGTCCAGTCTCATGCATATACTGACAGATGTTGTTAGCAATATAAAACATATCTTATTTTACcacttttgtgcatttttattcattatacaaAGGTTTTTGTTCTCAAATAGAagataaaaccttttaaagatCGTTTTAACCGTGCTGCGTTTAAGAAAAACAGCACACGCATTGGTGCGACCGCTATAGGAGGAGTTAGATCGTCACAGTGAGGCACTTATCAGTTACATATCAGGTCACCGGTTTTTGTCACCGTTTTTAATTTGTCGACGTTGAAGCCGTTTTGCGAAGTTCTCTCTTAACTGAAAATTGTAGAACTGCCAAAACTCCATGTTGTCTCCTCCATTGTTGCTGTTGAACTTCTGTCGTTCTTTTATTCTTGACCGAATGTAGTGTTGAAACTTCTAGATATGCATATCGTTTGACAAGTTTGAGTTTTGAGGTACATTCTCACAGACATATACTAAGAAACTGAATATGttacaaagaaagagagaaaaaaaaccgaGGTTAGTAAGCCTCTTCTCCTTTGTATCACCTATAATCCAGTTATTGTTCAGCTCATAATGCGTATATGCATTATttcttataaatgtttttatttatacacacattagAGAGATgctaataaattttatttttaa

Function

GO:

id name namespace
GO:0006468 protein phosphorylation biological_process
GO:0005524 ATP binding molecular_function
GO:0004674 protein serine/threonine kinase activity molecular_function

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU13907 lncRNA upstream 99182 4015450 ~ 4060976 (+) True G9304
TU13901 lncRNA upstream 138842 4013106 ~ 4021316 (+) True G9302
TU13909 lncRNA upstream 140443 4019339 ~ 4019715 (+) True G9305
TU13906 lncRNA upstream 140874 4015450 ~ 4019284 (+) False G9304
TU13810 lncRNA upstream 243675 3886082 ~ 3916483 (+) True G9241
TU14012 lncRNA downstream 51844 4223591 ~ 4224111 (+) True G9362
TU14006 lncRNA downstream 89021 4260768 ~ 4266016 (+) True G9356
TU14036 lncRNA downstream 207829 4379576 ~ 4379832 (+) True G9379
TU14039 lncRNA downstream 215180 4386927 ~ 4387444 (+) True G9382
TU14052 lncRNA downstream 287346 4459093 ~ 4462067 (+) False G9391
XM_043216993.1 mRNA upstream 10371 4054033 ~ 4149787 (+) False LOC122323258
XM_043261966.1 mRNA downstream 7707 4179454 ~ 4207112 (+) False LOC122361024
XM_043261979.1 mRNA downstream 7707 4179454 ~ 4207112 (+) False LOC122361024
XM_043261988.1 mRNA downstream 7793 4179540 ~ 4217008 (+) True LOC122361024
XM_043261973.1 mRNA downstream 8031 4179778 ~ 4207112 (+) False LOC122361024
XM_043261959.1 mRNA downstream 36305 4208052 ~ 4217008 (+) False LOC122361024
TU13731 other upstream 481224 3676425 ~ 3678934 (+) True G9173
TU13709 other upstream 543115 3615482 ~ 3617043 (+) True G9154
XR_006252450.1 other upstream 1420251 2729636 ~ 2739907 (+) False kdsr
XR_006252354.1 other upstream 1470531 2675370 ~ 2689627 (+) False LOC122356587
TU13151 other upstream 1523572 2635241 ~ 2636586 (+) True G8768
TU14011 other downstream 50492 4222239 ~ 4223112 (+) True G9361
TU14081 other downstream 392150 4563897 ~ 4570094 (+) False G9416
XR_006247003.1 other downstream 407527 4579274 ~ 4588478 (+) True mylk4a
TU14280 other downstream 726651 4898398 ~ 4899286 (+) False LOC122361055
TU14284 other downstream 737382 4909129 ~ 4909798 (+) False LOC122355892

Expression Profile