RNA id: XM_043260785.1


Basic Information

Item Value
RNA id XM_043260785.1
length 2554
RNA type mRNA
GC content 0.42
exon number 8
gene id guk1a
representative False

Chromosome Information

Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 3512889 ~ 3522776 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

ctgttttacttgttttattacattaagcTAACTACTGACTAACACAAAGCTGTGTTaatgagaaatgagaaatgctgccttgttatttattttatttcgattaacctctttttaattttattcaaagcaacaacaaaaaatagttAACAGACctgatttcagttttagtttccTATAACAACCCTGCATTGAAGCGCTGAATCAATCAATATACCTCATAGAAACACACGCTCCTGGCCAGATGACTGATAAAAGAGAGACAAGATAAGCAGACaactatgtaaataaaattaaaggtCAGTTGAATgtcttagtttaaaaaaaaaaaagaaaaaaaaagtacagcaaACTAAGAATCCTACTACGACGAGTCCTTCTCATGTTTATTAAACAGCTTGCGTCACGTCCGCCCAGTAAGGCCCCGCTGACGTCAGCGCTGCttgttaaatattcataagCCTGGCTTGCGCTTCCGCATAATTAACGAGCTGCGCGTGCGCTCCAGCGGGACGCGCCCGGCAGGTTACCAGGCAACGCCCACTAGACCTTATTAATATTCAGAAGCTCTGCCTTCGCGGTAGTAGGATTCGGAAAGCGGCGAGCTGCGGCCACGTCTCATGCCACTCTGGGCACCTTAACTAGAAAGTTAAAcacgtccacacacacacacctacaaaACCACAGCTGTGTCCGACTTACAAAACAATCAAGACGATGTAATGCGAGATCAAACCAAGGAAAAAGCGATGGCTGGACCGAGGCCTGTGGTGATGAGCGGACCGTCTGGAGCCGGAAAAAGCACTCTGCTCAAGAGGCTGCTCAAGGAGTTTGAAGGCGTGTTTGGCTTCAGCGTTTCCCATACAACGCGGAGCCCCCGACCAGGAGAGGAGAACGGCAAAGattatCACTATGTCACCAGGGAAGTGATGCAGGCGGCCATAGCACAGGGTGAATTTATCgaaaatgctgaattttcagggAACATGTATGGAACAAGTAAAGCAGCTGTGCAGGCCGTTCAGGCCAAAAATTTGATTTGCATTTTGGACATTGACATGCAGGGAGTGAAGAACATCAAGAGAACCGATCTCAACCCCATCTATGTGTCCATCCAGCCTCCGTCGATGGAAACCCTGGAAAAACGACTAAGGGATAGAAAAACTGAATCTGAGGAAAGTCTACAAAAACGTTTACACGCAGCCAAAGTTGACATGGAAATAAGTAAGGGTAAAGAGCCAGGTTTATTTGATGTGCTGATTATCAATGATGACCTTGACTTGGCTTATGGGAAATTAAAAGATGCTCTTCTTGagGAAATCCAGAAGGTCAGAGACAGCAACCAATCATAGGCGAGAGTGCACCTGCTGACCACGGAGACCTTCCCCTTCACCTCCAGCTTCAAACCTCAACATTCCTCCAGGAAAGACTTCCTGAGGTTCAGGCGATGCTCAAACACCGCCGAACCttacaaatatattcattacTATACGGTGCAAGACTGATATATTCCTAGCTCATTCTACGACCACTTACGTTACTTCCTGGGCTGAAGGTCAGAAGCCTGAAGATTCAACCATGAAACACTCTAAACTTTCAAGTCCttgtctttttctcattttttttaaaccaatggAAAAGATAATACAGATCATAGACTTTATATAACTTTCCAGCATGTTCACTAATTTATTGGGGGGTTTTTTCTATGCTGATCTTTTATAATAActcattctttccttttttgcaatgttttagCATTCGGAGCAGCGTGTTGCTTTCGTTCATATAAGTGCATCCGAACATCTGACATCGTACAAGTCCGGTAAAGCTCGCTTtaactcatttttaaaagacGGCGTCTCCTCTGCCGACGTCTTGAACCGCGTACACCGCACATTAGTCGGATTGCGCTTTTCACTTCAATATGTTTACCAGCTTTGAAAGTTTCAGAGCCGACTGTTTTTAGCGCAAGGCAGCTTATAAACACAGCCACTAGTCTCTAAGCAGGTTTAGGAGACATTATTGATGCTTTTAGTCTTATACAGCTCATCTTTAATAGATTGTTCCTCTATTAAATGTGACCATCAAGTAATATGGATACCAAGATGTACGTTTCTCCCAGCCTTTATAGTACTGTGTTACTCGGCGTTTGAACGTGAAAGAGATGTAATATAATAACTTGTGATGTACAGAGCTACTAACGAAACACGAAGTTAATCAGAAGCCAGTTGAGCAGACTCCGGATGTTTCCGGCGTGTGGAGCCATCTTGTGTATGTGGAGCATTTACAAGTTGActctttttatgatttttatggtttttgtttttaaatacgcTTGAAGGTCATGCCAGGCTTAGAGTCCATGGTCTTTCTCGTCATTCCTTGGTGCATCTTTAATATTTCCTTGAGAGACATCTATCAGATGTTTGTGGTGTTTGTGAAATCCGAAAAATGCAGTTCATGTCTAAACCAAATGTcgccttttcctttttttttattctagaaTTATTTACATGTACCGTGCAAGTATAATAAAGCCACATTAATACAgtga

Function

GO:

id name namespace
GO:0006163 purine nucleotide metabolic process biological_process
GO:0004385 guanylate kinase activity molecular_function

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU13515 lncRNA upstream 348070 3156600 ~ 3164823 (+) False gpr158b
TU13511 lncRNA upstream 391840 3116848 ~ 3121053 (+) True G9022
TU13209 lncRNA upstream 600106 2912291 ~ 2912787 (+) True G8816
TU13185 lncRNA upstream 651787 2819072 ~ 2861106 (+) True G8794
TU13184 lncRNA upstream 656484 2819072 ~ 2856409 (+) False G8794
TU13665 lncRNA downstream 494 3523270 ~ 3524571 (+) True G9130
TU13692 lncRNA downstream 40932 3563708 ~ 3564239 (+) True G9141
TU13693 lncRNA downstream 49661 3572437 ~ 3573075 (+) True G9142
TU13801 lncRNA downstream 257764 3780540 ~ 3780778 (+) True G9232
TU13803 lncRNA downstream 261563 3784339 ~ 3784667 (+) True G9234
XM_043217511.1 mRNA upstream 8638 3499580 ~ 3504255 (+) False arf1
XM_043217502.1 mRNA upstream 8638 3499735 ~ 3504255 (+) True arf1
XM_043254097.1 mRNA upstream 31714 3460727 ~ 3481179 (+) True wnt3a
XM_043263682.1 mRNA upstream 161309 3343658 ~ 3351584 (+) True snap47
XM_043263695.1 mRNA upstream 172919 3336399 ~ 3339974 (+) True iba57
XM_043253654.1 mRNA downstream 27459 3550235 ~ 3562870 (+) True zyg11l
XM_043253664.1 mRNA downstream 27459 3550235 ~ 3562870 (+) False zyg11l
XM_043253680.1 mRNA downstream 27459 3550235 ~ 3562870 (+) False zyg11l
XM_043253673.1 mRNA downstream 27459 3550235 ~ 3562507 (+) False zyg11l
XM_043261096.1 mRNA downstream 52880 3575656 ~ 3584040 (+) True serbp1b
XR_006252450.1 other upstream 772986 2729636 ~ 2739907 (+) False kdsr
XR_006252354.1 other upstream 823266 2675370 ~ 2689627 (+) False LOC122356587
TU13150 other upstream 876307 2635241 ~ 2636586 (+) False G8768
TU13151 other upstream 876307 2635241 ~ 2636586 (+) True G8768
XR_006247877.1 other upstream 894444 2618316 ~ 2618449 (+) True LOC122329004
TU13709 other downstream 92706 3615482 ~ 3617043 (+) True G9154
TU13731 other downstream 153649 3676425 ~ 3678934 (+) True G9173
TU14011 other downstream 699463 4222239 ~ 4223112 (+) True G9361
TU14081 other downstream 1041121 4563897 ~ 4570094 (+) False G9416
XR_006247003.1 other downstream 1056498 4579274 ~ 4588478 (+) True mylk4a

Expression Profile