RNA id: unassigned_transcript_204


Basic Information

Item Value
RNA id unassigned_transcript_204
length 75
RNA type tRNA
GC content 0.55
exon number 1
gene id trnag-gcc_20
representative True

Chromosome Information

Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 6220426 ~ 6220500 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

gcggtccttggtggttcagtggtagaatactcgcctgccacgcggtagacccgggttcgattcccggccaatgct

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU14477 lncRNA upstream 77561 6142042 ~ 6142865 (+) True G9697
TU14472 lncRNA upstream 360474 5852269 ~ 5859952 (+) True G9692
TU14470 lncRNA upstream 387736 5832357 ~ 5832690 (+) True G9690
TU14425 lncRNA upstream 389311 5770058 ~ 5831115 (+) True G9667
TU14431 lncRNA upstream 495410 5724701 ~ 5725016 (+) True G9671
TU14570 lncRNA downstream 155643 6376143 ~ 6376597 (+) True G9758
TU14665 lncRNA downstream 281890 6502390 ~ 6502594 (+) True G9825
TU14667 lncRNA downstream 291664 6512164 ~ 6512394 (+) True G9827
TU14674 lncRNA downstream 302305 6522805 ~ 6523467 (+) True G9834
TU14676 lncRNA downstream 303620 6524120 ~ 6524421 (+) True G9836
XM_043262112.1 mRNA upstream 381793 5836648 ~ 5838633 (+) True LOC122361161
XM_043223488.1 mRNA upstream 394176 5824154 ~ 5826250 (+) False dusp28
XM_043219558.1 mRNA downstream 15370 6235870 ~ 6239694 (+) True crfb16
XM_043255183.1 mRNA downstream 28548 6249048 ~ 6255573 (+) True mb21d2
XM_043217069.1 mRNA downstream 37051 6257551 ~ 6337572 (+) False fgf12a
XM_043217065.1 mRNA downstream 55516 6276016 ~ 6337572 (+) False fgf12a
XM_043217047.1 mRNA downstream 65422 6285922 ~ 6337572 (+) True fgf12a
unassigned_transcript_203 other upstream 106719 6113637 ~ 6113707 (+) True trnag-gcc_19
unassigned_transcript_202 other upstream 110779 6109573 ~ 6109647 (+) True trnag-gcc_18
unassigned_transcript_201 other upstream 142962 6077390 ~ 6077464 (+) True trnag-gcc_17
unassigned_transcript_200 other upstream 170400 6049952 ~ 6050026 (+) True trnag-gcc_16
unassigned_transcript_199 other upstream 182046 6038306 ~ 6038380 (+) True trnag-gcc_15
unassigned_transcript_205 other downstream 1945 6222445 ~ 6222519 (+) True trnag-gcc_21
TU14569 other downstream 146677 6367177 ~ 6367954 (+) True sst2
TU14734 other downstream 469872 6690372 ~ 6690779 (+) True G9887
TU14736 other downstream 471168 6691668 ~ 6692375 (+) True G9889
TU14783 other downstream 765798 6986298 ~ 6987119 (+) True G9925