Gene
RNA
| Item | Value |
|---|---|
| RNA id | CI01000010_04025764_04026729.mRNA |
| length | 1390 |
| RNA type | mRNA |
| GC content | 0.35 |
| exon number | 5 |
| gene id | CI01000010_04025764_04026729 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CI01000010 |
| NCBI id | null |
| chromosome length | 12265998 |
| location | 4025361 ~ 4027266 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| species | grasscarp (Ctenopharyngodon idella) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU71605 | lncRNA | upstream | 43875 | 3969811 ~ 3981486 (+) | True | G62871 |
| TU71604 | lncRNA | upstream | 55930 | 3966589 ~ 3969431 (+) | False | G62871 |
| TU71607 | lncRNA | upstream | 57945 | 3966589 ~ 3967416 (+) | False | G62871 |
| TU71602 | lncRNA | upstream | 60221 | 3964653 ~ 3965140 (+) | True | G62869 |
| TU71601 | lncRNA | upstream | 61198 | 3963748 ~ 3964163 (+) | True | G62868 |
| TU71636 | lncRNA | downstream | 27329 | 4054595 ~ 4061190 (+) | True | G62893 |
| TU71638 | lncRNA | downstream | 64779 | 4092045 ~ 4095387 (+) | True | G62895 |
| TU71672 | lncRNA | downstream | 263819 | 4291085 ~ 4291311 (+) | True | G62923 |
| TU71674 | lncRNA | downstream | 270095 | 4297361 ~ 4297627 (+) | True | G62925 |
| TU71675 | lncRNA | downstream | 272427 | 4299693 ~ 4299922 (+) | True | G62926 |
| CI01000010_04010515_04020837.mRNA | mRNA | upstream | 4463 | 4010515 ~ 4020898 (+) | True | CI01000010_04010515_04020837 |
| CI01000010_03952874_03957173.mRNA | mRNA | upstream | 68117 | 3952874 ~ 3957244 (+) | True | CI01000010_03952874_03957173 |
| CI01000010_03920171_03935066.mRNA | mRNA | upstream | 89502 | 3920171 ~ 3935859 (+) | True | CI01000010_03920171_03935066 |
| CI01000010_03915860_03918633.mRNA | mRNA | upstream | 106224 | 3915860 ~ 3919137 (+) | True | CI01000010_03915860_03918633 |
| CI01000010_03902240_03911029.mRNA | mRNA | upstream | 113906 | 3902106 ~ 3911455 (+) | True | CI01000010_03902240_03911029 |
| CI01000010_04046204_04137642.mRNA | mRNA | downstream | 18938 | 4046204 ~ 4137642 (+) | True | CI01000010_04046204_04137642 |
| CI01000010_04165584_04232583.mRNA | mRNA | downstream | 138318 | 4165584 ~ 4232583 (+) | True | CI01000010_04165584_04232583 |
| CI01000010_04368541_04374080.mRNA | mRNA | downstream | 341205 | 4368471 ~ 4374174 (+) | True | CI01000010_04368541_04374080 |
| CI01000010_04377762_04378990.mRNA | mRNA | downstream | 349881 | 4377147 ~ 4379082 (+) | True | CI01000010_04377762_04378990 |
| CI01000010_04437892_04443935.mRNA | mRNA | downstream | 410163 | 4437429 ~ 4444446 (+) | True | CI01000010_04437892_04443935 |
| TU71580 | other | upstream | 85416 | 3937757 ~ 3939945 (+) | True | G62856 |
| TU71560 | other | upstream | 131568 | 3890095 ~ 3893793 (+) | True | G62838 |
| TU70047 | other | upstream | 694175 | 3328458 ~ 3331186 (+) | True | G61480 |
| TU70029 | other | upstream | 825453 | 3194155 ~ 3199031 (+) | True | G61462 |
| TU69273 | other | upstream | 3077817 | 946794 ~ 946871 (+) | True | G60842 |
| TU71738 | other | downstream | 420906 | 4448172 ~ 4449327 (+) | True | G62983 |
| TU71841 | other | downstream | 613575 | 4640841 ~ 4653993 (+) | False | CI01000010_04640858_04683752 |
| TU71842 | other | downstream | 613575 | 4640841 ~ 4651767 (+) | True | CI01000010_04640858_04683752 |
| TU72215 | other | downstream | 1668179 | 5695445 ~ 5707085 (+) | False | G63403 |
| TU72214 | other | downstream | 1670157 | 5697423 ~ 5699465 (+) | False | G63403 |
| species | RNA id | representative | length | rna type | GC content | exon number | chromosome id | location |
|---|---|---|---|---|---|---|---|---|
| zebrafish (Danio rerio) | TCONS_00071011 | False | 1282 | lncRNA | 0.38 | 7 | NC_007119.7 | 17787316 ~ 17790965 (-) |
| bowfin (Amia calva) | TU92177 | True | 246 | lncRNA | 0.43 | 1 | CM030128.1 | 37172931 ~ 37173176 (+) |
| tiger barb (Puntius tetrazona) | TU92177 | True | 1595 | lncRNA | 0.39 | 5 | NC_056706.1 | 8918758 ~ 8920904 (-) |
