RNA id: TU464209


Basic Information

Item Value
RNA id TU464209
length 426
lncRNA type inter_gene
GC content 0.30
exon number 1
gene id G403821
representative True

Chromosome Information

Item Value
chromosome id CI01000299
NCBI id null
chromosome length 6567443
location 362893 ~ 363318 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

GTACAAGTAAGGTTAGGGTCAGGATTAGTGATATAGGTAGGTTTAAGGATGGGTTAAAAGGGAAGATAAGAGTTAATAGTGTAACTATAGGTGTAATTACAAAAATAACATGTAGGTAATTGTAATAAATACAATGTAAAAACATGTACATAAGTGCATTGTGTCAAATCATTAATTTAAATGTTAATACATGGTAGTTAAAGCCATCCAATATAAAGTGGGACCGGATTAGGATGGAAAAAAAGGCTCAAACTAGATATTTTAGTTTGCAATAAATGCATAAATTCCTAACACATTGCTCCCAAACAGGACCAGTATATTTTTTAAAATCGCTGTCAAAATTCTATAGACGCAACTGTAGTTATGAAATAATCATATTTTTTTTGCTAGAATCAGCGATGAAATACTATCAGGATACAATAAACT

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU464208 lncRNA downstream 197 362409 ~ 362696 (-) True G403820
TU464091 lncRNA downstream 31053 289941 ~ 331840 (-) False G403734
TU464093 lncRNA downstream 31053 297261 ~ 331840 (-) False G403734
TU464196 lncRNA downstream 44600 317619 ~ 318293 (-) True G403811
TU464092 lncRNA downstream 51063 297544 ~ 311830 (-) True G403734
TU464211 lncRNA upstream 829 364147 ~ 376471 (-) True G403822
TU464245 lncRNA upstream 60808 424126 ~ 424334 (-) True G403853
TU464246 lncRNA upstream 61581 424899 ~ 425153 (-) True G403854
TU464247 lncRNA upstream 61993 425311 ~ 425603 (-) True G403855
TU464248 lncRNA upstream 63552 426870 ~ 427152 (-) True G403856
CI01000299_00185106_00209299.mRNA mRNA downstream 153594 184774 ~ 209299 (-) True CI01000299_00185106_00209299
CI01000299_00169255_00170695.mRNA mRNA downstream 191907 169223 ~ 170986 (-) True CI01000299_00169255_00170695
CI01000299_00448948_00449565.mRNA mRNA upstream 85545 448863 ~ 449757 (-) True CI01000299_00448948_00449565
CI01000299_00452374_00452868.mRNA mRNA upstream 88023 451341 ~ 452868 (-) True CI01000299_00452374_00452868
CI01000299_00670925_00672195.mRNA mRNA upstream 307362 670680 ~ 673625 (-) False CI01000299_00670925_00672195
CI01000299_01003547_01034507.mRNA mRNA upstream 640001 1003319 ~ 1034812 (-) True CI01000299_01003547_01034507
CI01000299_01057889_01063623.mRNA mRNA upstream 694502 1057820 ~ 1063623 (-) True CI01000299_01057889_01063623
TU464604 other upstream 307516 670834 ~ 672856 (-) True CI01000299_00670925_00672195
TU464792 other upstream 707289 1070607 ~ 1075891 (-) True G404372
TU465225 other upstream 1296337 1659655 ~ 1660000 (-) True G404784
TU465428 other upstream 1492321 1855639 ~ 1880988 (-) True G404976
TU465509 other upstream 1654369 2017687 ~ 2018050 (-) True G405053

Expression Profile