Fish Single-cell RNA Database

CELL TYPE: Comitted progenitors

Distribution of Comitted progenitors in Tissues/Organs

The figure shows the distribution of cell number of each tissue in different species.
Click on the tissue on the x-axis to browse the detailed information of the tissue.
Click on the species on legend to browse the detailed information of the species.

Word Cloud of All Markers

Function

Gene ID	Symbol	Location
ENSDARG00000068432	si:dkey-56m19.5	7: 44713135 ~ 44717498 (+)
ENSDARG00000052082	gabarapb	7: 69470142 ~ 69478567 (+)
ENSDARG00000010878	cdkn1ca	7: 48663031 ~ 48667056 (-)
ENSDARG00000079012	cbfa2t3	7: 55660263 ~ 55675617 (-)
ENSDARG00000086327	srrm4	5: 15667874 ~ 15817204 (+)
ENSDARG00000004232	dlb	5: 36693859 ~ 36701760 (+)
ENSDARG00000042525	ebf2	5: 67390115 ~ 67441054 (+)
ENSDARG00000014420	elavl3	3: 46800190 ~ 46818001 (-)
ENSDARG00000097082	im:7152348	6: 27884372 ~ 27891961 (-)
ENSDARG00000010791	dla	1: 54013457 ~ 54026352 (+)
ENSDARG00000015559	fstl1a	1: 47459723 ~ 47485360 (+)
ENSDARG00000009823	pou3f1	16: 33593116 ~ 33595985 (+)
ENSDARG00000028017	tp53inp1	16: 40560622 ~ 40569769 (+)
ENSDARG00000095743	sox11b	20: 30032628 ~ 30035326 (-)
ENSDARG00000013843	sept5a	8: 4588398 ~ 4618653 (-)
ENSDARG00000056175	scrt2	8: 28527776 ~ 28534245 (+)
ENSDARG00000056130	neurog1	14: 26703331 ~ 26704829 (-)
ENSDARG00000053484	syne2b	13: 37075322 ~ 37254777 (-)
ENSDARG00000020219	dld	13: 6075572 ~ 6081803 (-)
ENSDARG00000006497	rtn1a	13: 31424586 ~ 31470439 (-)
ENSDARG00000088984	cep131	12: 35836610 ~ 35885349 (-)
ENSDARG00000034668	celf3a	19: 8816657 ~ 8880688 (-)
ENSDARG00000017673	nova2	15: 28685625 ~ 28766824 (+)
ENSDARG00000007097	her13	15: 7187228 ~ 7190183 (+)
ENSDARG00000074030	myt1a	23: 30767310 ~ 30787932 (-)
ENSDARG00000056732	her4.1	23: 21452557 ~ 21453614 (-)
ENSDARG00000056729	her4.2	23: 21469203 ~ 21471022 (-)
ENSDARG00000093156	si:ch73-21g5.7	23: 21473103 ~ 21474476 (+)
ENSDARG00000102879	myt1b	23: 7762033 ~ 7826849 (-)
ENSDARG00000003469	neurod4	23: 28343988 ~ 28347039 (-)
ENSDARG00000103554	notch1a	21: 4766244 ~ 4849056 (-)
ENSDARG00000077906	rnf165a	21: 4974256 ~ 5007163 (-)
ENSDARG00000016725	gadd45gb.1	21: 20715020 ~ 20716561 (+)
ENSDARG00000088178	tp53inp2	11: 25257022 ~ 25266235 (+)
ENSDARG00000061099	nfasca	11: 23704410 ~ 23884805 (+)
ENSDARG00000010008	vim	24: 32176155 ~ 32192681 (+)
ENSDARG00000040884	mxi1	22: 30330574 ~ 30361078 (+)
ENSDARG00000002215	rtca	22: 16282144 ~ 16291041 (-)
--	si:ch211-163l21.4	--
--	si:ch211-193l2.4	--
--	si:ch211-193l2.6	--
--	si:ch211-193l2.7	--
--	si:ch211-193l2.8	--

The figures above shows the results of GO/KEGG/PPI of marker/potential marker genes of Comitted progenitors.

Detail Marker Information in Datasets

	Dataset ID	Species	Tissue / Organ	Cell cluster	Cell type	Experiment type	Sample	Marker gene	Marker class	Evidence
	GSE158142 (18hpf)	Danio rerio	head	9	Comitted progenitors	baseline	18hpf, 18 somites, untreatment	ENSDARG00000016725 (gadd45gb.1)	marker	DOI:10.1016/j.neuron.2020.09.023
	GSE158142 (18hpf)	Danio rerio	head	9	Comitted progenitors	baseline	18hpf, 18 somites, untreatment	ENSDARG00000007097 (her13)	marker	DOI:10.1016/j.neuron.2020.09.023

After clicking the magnifying glass button, the clustering and expression information of this marker gene will be displayed below.

species	Danio rerio
tissue	pituitary
cell type	Erythroid cells
gene	ENSDARG00000077809 il13
project	GSE158142
dataset	GSE158142 (20hpf)

CELL TYPE: Comitted progenitors

Distribution of Comitted progenitors in Tissues/Organs

Word Cloud of All Markers

Function

Detail Marker Information in Datasets

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