Fish Single-cell RNA Database

CELL TYPE: Neural crest cells

Distribution of Neural crest cells in Tissues/Organs

The figure shows the distribution of cell number of each tissue in different species.
Click on the tissue on the x-axis to browse the detailed information of the tissue.
Click on the species on legend to browse the detailed information of the species.

Word Cloud of All Markers

Function

Gene ID	Symbol	Location
ENSDARG00000020871	ptprz1b	4: 4834085 ~ 4926061 (+)
ENSDARG00000045485	rassf8b	4: 20507105 ~ 20521441 (-)
ENSDARG00000058042	kitlgb	4: 9508505 ~ 9515398 (+)
ENSDARG00000019328	plxna4	4: 15217929 ~ 15420452 (-)
ENSDARG00000060610	pcdh7b	7: 63324888 ~ 63570206 (+)
ENSDARG00000077329	nlgn2a	7: 21940857 ~ 22132265 (-)
ENSDARG00000043313	ank2b	7: 57886148 ~ 58130703 (-)
ENSDARG00000103648	znf536	7: 46252993 ~ 46514996 (+)
ENSDARG00000086033	tspan5a	7: 69601812 ~ 69636502 (-)
ENSDARG00000090654	gak	5: 9441198 ~ 9540770 (-)
ENSDARG00000062711	gal3st1a	5: 12888260 ~ 12906542 (+)
ENSDARG00000014003	stard8	5: 35786141 ~ 35867256 (+)
ENSDARG00000098540	zc3h7ba	3: 4458390 ~ 4501026 (-)
ENSDARG00000007344	tcap	3: 21240594 ~ 21242460 (-)
ENSDARG00000077467	sox10	3: 1492174 ~ 1501255 (+)
ENSDARG00000038139	pdgfbb	3: 24275597 ~ 24297419 (+)
ENSDARG00000034588	scn4ab	3: 22242269 ~ 22316844 (+)
ENSDARG00000028048	rdh8a	3: 53687645 ~ 53722182 (-)
ENSDARG00000098294	col5a3a	3: 53773256 ~ 53919463 (+)
ENSDARG00000084991	BX284638.1	3: 6038203 ~ 6038338 (+)
ENSDARG00000070792	lrrc15	6: 36459897 ~ 36463695 (+)
ENSDARG00000021032	foxd3	6: 32092032 ~ 32093830 (-)
ENSDARG00000103277	cyp24a1	6: 55852274 ~ 55864687 (-)
ENSDARG00000057013	cadm3	2: 44049081 ~ 44183613 (-)
ENSDARG00000014522	cdh6	2: 28049046 ~ 28102264 (-)
ENSDARG00000054754	hs6st1a	2: 40901997 ~ 41124013 (-)
ENSDARG00000061848	col15a1b	2: 23936954 ~ 24022085 (-)
ENSDARG00000004621	gpm6ab	1: 38649141 ~ 38756904 (-)
ENSDARG00000052713	lrrtm1	1: 42776553 ~ 42779075 (-)
ENSDARG00000037455	ugt8	1: 20556067 ~ 20593778 (-)
ENSDARG00000098769	slitrk6	1: 4101741 ~ 4154332 (+)
ENSDARG00000055009	col4a1	9: 8634229 ~ 8670158 (-)
ENSDARG00000035810	rgcc	9: 17438765 ~ 17449872 (+)
ENSDARG00000061517	lrp1bb	9: 36314867 ~ 36694998 (+)
ENSDARG00000060222	scn1ba	16: 41873708 ~ 41897745 (+)
ENSDARG00000033172	nr2f5	16: 46294337 ~ 46327301 (+)
ENSDARG00000035309	entpd3	16: 8258203 ~ 8280885 (-)
ENSDARG00000103181	si:dkey-34d22.1	16: 35343493 ~ 35379565 (+)
ENSDARG00000087087	col28a1b	16: 47308856 ~ 47344147 (+)
ENSDARG00000043257	ckbb	20: 20816747 ~ 20821789 (-)
ENSDARG00000028354	stxbp6l	20: 9828769 ~ 9848953 (+)
ENSDARG00000036820	mgll	8: 26292560 ~ 26326501 (+)
ENSDARG00000058853	sash1b	17: 6985428 ~ 7060477 (-)
ENSDARG00000089162	afap1l1a	14: 34562426 ~ 34633960 (-)
ENSDARG00000104786	nlgn3a	14: 14224730 ~ 14534457 (+)
ENSDARG00000014215	cdh13	18: 13792490 ~ 14134035 (+)
ENSDARG00000040503	sb:cb81	18: 49309953 ~ 49318823 (-)
ENSDARG00000056525	bcar1	18: 22504200 ~ 22688073 (+)
ENSDARG00000006025	tp53i11b	18: 27439680 ~ 27570030 (+)
ENSDARG00000034470	aldoab	12: 4052180 ~ 4070058 (-)
ENSDARG00000071709	ppp1r9bb	12: 9703172 ~ 9774747 (+)
ENSDARG00000089223	ngfrb	12: 9949941 ~ 10038870 (-)
ENSDARG00000104442	aatkb	12: 35702809 ~ 35787801 (-)
ENSDARG00000057913	syt11a	19: 23982466 ~ 24034710 (+)
ENSDARG00000056934	hepacama	15: 22311803 ~ 22325973 (+)
ENSDARG00000005368	mcamb	15: 23271862 ~ 23342752 (-)
ENSDARG00000078748	si:ch211-137a8.4	15: 29085955 ~ 29091807 (+)
ENSDARG00000032865	pacsin1a	23: 3653386 ~ 3703569 (-)
ENSDARG00000037517	slc35c2	23: 20431140 ~ 20511954 (+)
ENSDARG00000076564	hspg2	23: 26543716 ~ 26725637 (-)
ENSDARG00000036993	erbb3b	23: 25232411 ~ 25287666 (+)
ENSDARG00000077257	timd4	21: 29090652 ~ 29100110 (-)
ENSDARG00000031246	hbegfb	21: 30161295 ~ 30168949 (-)
ENSDARG00000070511	si:dkey-183j2.10	11: 25735478 ~ 25750060 (+)
ENSDARG00000039647	slc6a1b	11: 997100 ~ 1024483 (-)
ENSDARG00000074316	itga1	10: 8730988 ~ 8841038 (+)
ENSDARG00000026531	alcama	10: 28731749 ~ 28835812 (-)
ENSDARG00000013005	opcml	10: 30617826 ~ 30785501 (-)
ENSDARG00000044048	prnpb	10: 20628698 ~ 20632779 (+)
ENSDARG00000010008	vim	24: 32176155 ~ 32192681 (+)
ENSDARG00000060668	tm4sf18	22: 38159823 ~ 38168571 (+)
ENSDARG00000074633	gpr35.1	22: 3252936 ~ 3261879 (-)

The figures above shows the results of GO/KEGG/PPI of marker/potential marker genes of Neural crest cells.

Detail Marker Information in Datasets

	Dataset ID	Species	Tissue / Organ	Cell cluster	Cell type	Experiment type	Sample	Marker gene	Marker class	Evidence
	GSE144944 (fgfr3 +\|+)	Danio rerio	cranial vault	14	Neural crest cells	baseline	1mpf, fgfr3 +/+	ENSDARG00000021032 (foxd3)	marker	DOI:10.1002/jbmr.4042

After clicking the magnifying glass button, the clustering and expression information of this marker gene will be displayed below.

species	Danio rerio
tissue	pituitary
cell type	Erythroid cells
gene	ENSDARG00000077809 il13
project	GSE158142
dataset	GSE158142 (20hpf)

CELL TYPE: Neural crest cells

Distribution of Neural crest cells in Tissues/Organs

Word Cloud of All Markers

Function

Detail Marker Information in Datasets

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