GENE ID: ENSDARG00000098769

Symbol Location Gene type Genome version Species
slitrk6 1: 4101741 ~ 4154332 (+) protein_coding GRCz11 Danio rerio

MARKER



EXPRESSION

Dataset ID Tissue / Organ Experiment type Sample Cell type Marker class Evidence
GSE144944 (fgfr3 +|+) cranial vault baseline 1mpf, fgfr3 +/+ Neural crest cells (cluster: 14)
 potential marker
 NA
GSE168695 (5dpf) embryo baseline 5dpf, GFP+ cells isolated from 5 dpf cldnb:lyn-EGFP embryos
PRJNA551501 (8mpf) thyroid gland baseline 8mpf, Tg(tg:mVenus-T2A-NTR) Non-follicular epithelium (cluster: 3)
 potential marker
 NA
PRJNA415636 (brain) brain baseline adult, Zebrabow M, brain
PRJNA554650 (6.5dpf) brain baseline 6.5dpf, whole brain of nr1d1:VNP fish
GSE158142 (5dpf) brain, eye baseline 5dpf, untreatment
GSE158142 (8dpf) brain, eye baseline 8dpf, untreatment
PRJNA610520 (3.5dpf) caudal hematopoietic tissue baseline 3.5dpf, the mixture of same amount of kdrl:mCherry+ cells, CD41:GFP+ cells and double negative cells.
GSE144944 (fgfr3 -|-) cranial vault growth 1mpf, fgfr3 -/-
PRJNA640816 (2.9dpf) embryo baseline 2.9dpf, FACS isolated -4.9sox10:EGFP+ cells
PRJNA656271 (24hpf) embryo baseline 24hpf, FACS-isolated EGFP+ cells
PRJNA564810 (5dpf) embryo baseline 5dpf, a single-cell transcriptome atlas for zebrafish development
PRJNA706197 (18hpf) embryo baseline 18hpf, FACS sorted sox10:nEOS cells
PRJNA656271 (1.5dpf) embryo baseline 1.5dpf, FACS-isolated EGFP+ cells
PRJNA564810 (2dpf) embryo baseline 2dpf, a single-cell transcriptome atlas for zebrafish development
GSE173972 (WT, ezh1+|+) embryo baseline 1.25dpf, Kdrl-positive embryos
PRJNA564810 (1dpf) embryo baseline 1dpf, a single-cell transcriptome atlas for zebrafish development
PRJNA656271 (2dpf) embryo baseline 2dpf, FACS-isolated EGFP+ cells
GSE158142 (18hpf) head baseline 18hpf, 18 somites, untreatment
GSE158142 (2dpf) head baseline 2dpf, untreatment
GSE158142 (3dpf) head baseline 3dpf, untreatment
PRJNA608912 (wt_2dpi) heart regeneration 5mpf, wild type, 2 days post injury
PRJNA415636 (pancreas, liver) hepatopancreas baseline adult, Zebrabow M, pancreas and liver
PRJNA754013 (zebrafish) hypothalamus baseline adult, male, female, untreatment
GSE150498 (nod2-|-, 2X DSS+BZA) intestine disease 6dpf, nod2-/-, 2X DSS+BZA
GSE150498 (wildtype, 2X DSS) intestine disease 6dpf, wildtype, 2X DSS
GSE150498 (nod2-|-, untreated) intestine disease 6dpf, nod2-/-, untreated
GSE150498 (wildtype, 2X DSS+BZA) intestine disease 6dpf, wildtype, 2X DSS+BZA
GSE150498 (wildtype, 1X DSS) intestine disease 6dpf, wildtype, 1X DSS
GSE150498 (nod2-|-, 2X DSS) intestine disease 6dpf, nod2-/-, 2X DSS
GSE150498 (nod2-|-, 1X DSS) intestine disease 6dpf, nod2-/-, 1X DSS
GSE150498 (wildtype, untreated) intestine baseline 6dpf, wildtype, untreated
PRJNA605021 (hair cells) neuromast baseline 7dpf, posterior lateral-line neuromast cells were isolated from the dissociated trunks of Tg[myo6b:actb1-EGFP] transgenic zebrafish larvae
PRJNA605021 (supporting cells) neuromast baseline 7dpf, posterior lateral-line neuromast cells were isolated from the dissociated trunks of Tg[Et(krt4:EGFP)sqgw57A] transgenic zebrafish larvae
GSE123241 (wild type) neuromast baseline 5dpf, wild type during sensory hair cell regeneration, lateral line sensory
PRJNA668529 (3h) olfactory rosette disease 3mpf, intranasal 100ng r-Spike 3 hours
PRJNA668529 (control) olfactory rosette baseline 3mpf, intranasal PBS
PRJNA668529 (3d) olfactory rosette disease 3mpf, intranasal 100ng r-Spike 3 days
GSE148591 (3mpf) pituitary transplant 3mpf, graft transplantation during early embryogenesis
GSE148591 (6mpf) pituitary baseline 6mpf, male, Sox17:CreERT2
PRJNA415636 (primary pancreatic islet) primary pancreatic islet baseline adult, Zebrabow M, primary pancreatic islet
PRJNA672101 (nrl-KO) retina growth 5mpf, three retinas from nrl-KO zebrafsih
GSE122680 (2dpf) retina baseline 2dpf, WT, untreatment
PRJNA672101 (WT) retina baseline 5mpf, three retinas from WT zebrafsih
GSE175929 (5mpf) retina baseline 5mpf, GFP-positive cells collected from two transgenic zebrafish, Tg(rho:EGFP)ja2Tg and Tg(gnat2:EGFP)ja23Tg
PRJNA551501 (2mpf) thyroid gland baseline 2mpf, Tg(tg:mVenus-T2A-NTR)
GSE152982 (wild type) trunk baseline 1.25dpf, untreatment
GSE163907 (24hpf) trunk baseline 24hpf, trunk tg(sox10:GFP) positive cells
GSE131136 (all) trunk, skin baseline 5dpf, sox10:CRE positive cells from 5dpf and post-embryonic zebrafish trunks with and without thyroid hormone
PRJNA641144 (C_INV) tumor disease adult, ZMEL1-INV cells in vitro co-culture
PRJNA641144 (M_INV) tumor disease adult, ZMEL1-INV cells in vivo metastases
PRJNA641144 (M_PRO) tumor disease adult, ZMEL1-PRO cells in vivo metastases
PRJNA641144 (P_INV) tumor disease adult, ZMEL1-INV cells in vivo primary tumors
GSE159709 (melanoma) tumor disease adult, equal numbers of sorted GFP+ (tumor) and GFP- (macroenvironment) cells
PRJNA641144 (D_PRO) tumor disease adult, ZMEL1-PRO cells in vitro individual culture
PRJNA641144 (P_PRO) tumor disease adult, ZMEL1-PRO cells in vivo primary tumors
GSE158099 (runx1 -|-) whole body hematopoietic 16dpf, cd41:GFPlow-runx1-/-
GSE158099 (WT) whole body baseline 6dpf, cd41:GFPlow-WT
GSE176129 (pdgfrb-positive) whole body baseline 5dpf, FACS-isolated pdgfrb-positive cells
GSE158099 (runx1 -|-) whole body hematopoietic 16dpf, cd41:GFPlow-runx1-/-
GSE158099 (runx1 -|-) whole body hematopoietic 6dpf, cd41:GFPlow-runx1-/-
GSE158099 (WT) whole body baseline 16dpf, cd41:GFPlow-WT
GSE158099 (WT) whole body baseline 2.5dpf, cd41:GFPlow-WT

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