DATASET ID: GSE158099 (WT)


Basic information


Tissue / Organ whole body
Experiment type baseline
Sample 16dpf, cd41:GFPlow-WT
Source dataset ID GSM4792214
Project ID GSE158099
Species Danio rerio

Clustering Result


Function


  • The figures above shows the results of GO/KEGG/PPI of marker/potential marker genes in each cell cluster.
  • The button on the left can be used to select the target cell cluster.
  • Marker Relationship


    Cluster Cell type Gene id (symbol) Gene type Marker class Evidence
    1 HSPCs ENSDARG00000043126 (blf) protein_coding marker DOI:10.1182/bloodadvances.2020003969
    1 HSPCs ENSDARG00000004392 (hdr) protein_coding marker DOI:10.1182/bloodadvances.2020003969
    1 HSPCs ENSDARG00000019930 (tal1) protein_coding marker DOI:10.1182/bloodadvances.2020003969
    2 Multipotent cells ENSDARG00000078781 (si:ch211-161c3.6) protein_coding marker DOI:10.1182/bloodadvances.2020003969
    3 Multipotent cells ENSDARG00000055186 (ccr9a) protein_coding marker DOI:10.1182/bloodadvances.2020003969
    5 Neutrophils ENSDARG00000019521 (mpx) protein_coding marker DOI:10.1182/bloodadvances.2020003969
    6 Multipotent cells ENSDARG00000058471 (plk1) protein_coding marker DOI:10.1182/bloodadvances.2020003969
    7 Macrophages ENSDARG00000013771 (ctss2.2) protein_coding marker DOI:10.1182/bloodadvances.2020003969
    8 Neuron ENSDARG00000036577 (atp6v0cb) protein_coding marker DOI:10.1182/bloodadvances.2020003969
    9 Neutrophils ENSDARG00000102119 (si:ch73-359m17.2) protein_coding marker DOI:10.1182/bloodadvances.2020003969
    11 Macrophages ENSDARG00000077809 (il13) protein_coding marker DOI:10.1182/bloodadvances.2020003969
    13 Epidermal cells ENSDARG00000016691 (cd9b) protein_coding marker DOI:10.1182/bloodadvances.2020003969
    14 Epidermal cells ENSDARG00000102750 (cdh1) protein_coding marker DOI:10.1182/bloodadvances.2020003969

    Expression



    • The expression of marker genes of each cluster is shown in the figure above.
    • More detailed expression of marker gene can be viewed in the gene details page. (Follow the links in the table above)