GENE ID: ENSDARG00000055186

Symbol Location Gene type Genome version Species
ccr9a 2: 32796873 ~ 32799083 (+) protein_coding GRCz11 Danio rerio

  • PPI (protein-protein interaction) results are shown above.
  • Green is ENSDARG00000055186 (ccr9a), yellow represents other genes.
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    • MARKER



    EXPRESSION

    Dataset ID Tissue / Organ Experiment type Sample Cell type Marker class Evidence
    PRJNA415636 (brain) brain baseline adult, Zebrabow M, brain Lymphocyte cells (cluster: 6)
    		 marker
    		 DOI:10.1038/nbt.4124
    GSE144944 (fgfr3 -|-) cranial vault growth 1mpf, fgfr3 -/- Immune cells (cluster: 4)
    Immune cells (cluster: 11)
    Immune cells (cluster: 20)
    		 marker
    marker
    marker
    		 DOI:10.1016/j.celrep.2019.04.030
    DOI:10.1016/j.celrep.2019.04.030
    DOI:10.1016/j.celrep.2019.04.030
    GSE144944 (fgfr3 +|+) cranial vault baseline 1mpf, fgfr3 +/+ Immune cells (cluster: 4)
    Immune cells (cluster: 8)
    Immune cells (cluster: 10)
    Immune cells (cluster: 12)
    Immune cells (cluster: 19)
    Immune cells (cluster: 20)
    		 marker
    marker
    marker
    marker
    marker
    marker
    		 DOI:10.1016/j.celrep.2019.04.030
    DOI:10.1016/j.celrep.2019.04.030
    DOI:10.1002/jbmr.4042
    DOI:10.1016/j.celrep.2019.04.030
    DOI:10.1038/nature25969
    DOI:10.1016/j.celrep.2019.04.030
    PRJNA564810 (5dpf) embryo baseline 5dpf, a single-cell transcriptome atlas for zebrafish development Multipotent cells (cluster: 14)
    		 marker
    		 DOI:10.1093/g3journal/jkac062
    PRJNA668529 (3d) olfactory rosette disease 3mpf, intranasal 100ng r-Spike 3 days Lymphocyte cells (cluster: 1)
    		 marker
    		 DOI:10.1007/s00251-007-0250-6, DOI:10.1016/j.bbi.2022.03.006
    PRJNA668529 (3h) olfactory rosette disease 3mpf, intranasal 100ng r-Spike 3 hours Lymphocyte cells (cluster: 2)
    		 marker
    		 DOI:10.1007/s00251-007-0250-6, DOI:10.1016/j.bbi.2022.03.006
    PRJNA668529 (control) olfactory rosette baseline 3mpf, intranasal PBS Lymphocyte cells (cluster: 2)
    		 marker
    		 DOI:10.1007/s00251-007-0250-6, DOI:10.1016/j.bbi.2022.03.006
    GSE158099 (WT) whole body baseline 6dpf, cd41:GFPlow-WT Multipotent cells (cluster: 4)
    		 marker
    		 DOI:10.1182/bloodadvances.202000396
    GSE158099 (WT) whole body baseline 10dpf, cd41:GFPlow-WT Multipotent cells (cluster: 1)
    		 marker
    		 DOI:10.1182/bloodadvances.2020003969
    GSE158099 (WT) whole body baseline 16dpf, cd41:GFPlow-WT Multipotent cells (cluster: 3)
    		 marker
    		 DOI:10.1182/bloodadvances.2020003969
    GSE158142 (15dpf) brain, eye baseline 15dpf, untreatment Blood,immune cell (cluster: 15)
    		 potential marker
    		 NA
    PRJNA610520 (3.5dpf) caudal hematopoietic tissue baseline 3.5dpf, the mixture of same amount of kdrl:mCherry+ cells, CD41:GFP+ cells and double negative cells. Monocytes (cluster: 1)
    Myeloid cells (cluster: 8)
    Epidermal cells (cluster: 9)
    		 potential marker
    potential marker
    potential marker
    		 NA
    NA
    NA
    PRJNA610520 (4.5dpf) caudal hematopoietic tissue baseline 4.5dpf, the mixture of same amount of kdrl:mCherry+ cells, CD41:GFP+ cells and double negative cells. Macrophages (cluster: 13)
    Monocytes (cluster: 6)
    Myeloid cells (cluster: 7)
    		 potential marker
    potential marker
    potential marker
    		 NA
    NA
    NA
    GSE130526 (fin) dorsal and anal fin baseline adult, fins were amputated from fish expressing both pnp4a:palmmCherry and tyrp1b:palmmCherry Immune cells (cluster: 5)
    		 potential marker
    		 NA
    GSE173972 (WT, ezh1+|+) embryo baseline 1.25dpf, Kdrl-positive embryos Neutrophils (cluster: 5)
    		 potential marker
    		 NA
    GSE173972 (HET, ezh1+|-) embryo hematopoietic 1.25dpf, Kdrl-positive embryos Neutrophils (cluster: 6)
    		 potential marker
    		 NA
    GSE173972 (KO, ezh1-|-) embryo hematopoietic 1.25dpf, Kdrl-positive embryos Neutrophils (cluster: 6)
    		 potential marker
    		 NA
    PRJNA564810 (2dpf) embryo baseline 2dpf, a single-cell transcriptome atlas for zebrafish development Monocytes (cluster: 24)
    		 potential marker
    		 NA
    PRJNA608912 (wt_unjuried) heart baseline 5mpf, wild type, uninjured Immune cells (cluster: 9)
    		 potential marker
    		 NA
    PRJNA608912 (wt_2dpi) heart regeneration 5mpf, wild type, 2 days post injury Macrophages (cluster: 2)
    Coronary endothelial cells (cluster: 5)
    Macrophages (cluster: 6)
    		 potential marker
    potential marker
    potential marker
    		 NA
    NA
    NA
    PRJNA608912 (wt_7dpi) heart regeneration 5mpf, wild type, 7 days post injury Macrophages (cluster: 1)
    Immune cells (cluster: 8)
    		 potential marker
    potential marker
    		 NA
    NA
    PRJNA608912 (wt_14dpi) heart regeneration 5mpf, wild type, 14 days post injury Immune cells (cluster: 7)
    		 potential marker
    		 NA
    PRJNA608912 (kit_uninjuried) heart regeneration 5mpf, kit mutant, uninjured Immune cells (cluster: 12)
    		 potential marker
    		 NA
    PRJNA608912 (kit_2dpi) heart regeneration 5mpf, kit mutant, 2 days post injury Macrophages (cluster: 5)
    		 potential marker
    		 NA
    PRJNA608912 (kit_7dpi) heart regeneration 5mpf, kit mutant, 7 days post injury Macrophages (cluster: 2)
    Immune cells (cluster: 9)
    		 potential marker
    potential marker
    		 NA
    NA
    PRJNA608912 (kit_14dpi) heart regeneration 5mpf, kit mutant, 14 days post injury Immune cells (cluster: 9)
    		 potential marker
    		 NA
    PRJNA415636 (heart, blood) heart, blood baseline adult, Zebrabow M, heart and blood B cells (cluster: 13)
    T cells (cluster: 7)
    		 potential marker
    potential marker
    		 NA
    NA
    PRJNA754013 (zebrafish) hypothalamus baseline adult, male, female, untreatment Macrophages (cluster: 7)
    		 potential marker
    		 NA
    GSE150498 (wildtype, untreated) intestine baseline 6dpf, wildtype, untreated Proliferative myeloid + ILC (cluster: 9)
    		 potential marker
    		 NA
    GSE150498 (nod2-|-, untreated) intestine disease 6dpf, nod2-/-, untreated Proliferative myeloid + ILC (cluster: 5)
    		 potential marker
    		 NA
    GSE150498 (wildtype, 1X DSS) intestine disease 6dpf, wildtype, 1X DSS Proliferative myeloid + ILC (cluster: 8)
    		 potential marker
    		 NA
    GSE150498 (nod2-|-, 1X DSS) intestine disease 6dpf, nod2-/-, 1X DSS Proliferative myeloid + ILC (cluster: 6)
    		 potential marker
    		 NA
    GSE150498 (wildtype, 2X DSS) intestine disease 6dpf, wildtype, 2X DSS Proliferative myeloid + ILC (cluster: 5)
    		 potential marker
    		 NA
    GSE150498 (nod2-|-, 2X DSS) intestine disease 6dpf, nod2-/-, 2X DSS Proliferative myeloid + ILC (cluster: 5)
    		 potential marker
    		 NA
    GSE150498 (nod2-|-, 2X DSS+BZA) intestine disease 6dpf, nod2-/-, 2X DSS+BZA Proliferative myeloid + ILC (cluster: 6)
    		 potential marker
    		 NA
    GSE137784 (HCC, HepABC) liver disease 6mpf, male, isolated from the Tg(fabp10a:pt-B-cat)(HepABC) zebrafish with HCC Immune cells (cluster: 7)
    		 potential marker
    		 NA
    PRJNA605021 (supporting cells) neuromast baseline 7dpf, posterior lateral-line neuromast cells were isolated from the dissociated trunks of Tg[Et(krt4:EGFP)sqgw57A] transgenic zebrafish larvae
    PRJNA605021 (hair cells) neuromast baseline 7dpf, posterior lateral-line neuromast cells were isolated from the dissociated trunks of Tg[myo6b:actb1-EGFP] transgenic zebrafish larvae
    PRJNA415636 (primary pancreatic islet) primary pancreatic islet baseline adult, Zebrabow M, primary pancreatic islet T cells (cluster: 13)
    		 potential marker
    		 NA
    PRJNA672101 (nrl-KO) retina growth 5mpf, three retinas from nrl-KO zebrafsih Microglia (cluster: 12)
    		 potential marker
    		 NA
    PRJNA551501 (2mpf) thyroid gland baseline 2mpf, Tg(tg:mVenus-T2A-NTR)
    PRJNA551501 (8mpf) thyroid gland baseline 8mpf, Tg(tg:mVenus-T2A-NTR) Immune cells (cluster: 5)
    		 potential marker
    		 NA
    GSE131136 (all) trunk, skin baseline 5dpf, sox10:CRE positive cells from 5dpf and post-embryonic zebrafish trunks with and without thyroid hormone
    GSE159709 (melanoma) tumor disease adult, equal numbers of sorted GFP+ (tumor) and GFP- (macroenvironment) cells Macrophages (cluster: 4)
    Neutrophils (cluster: 7)
    		 potential marker
    potential marker
    		 NA
    NA
    PRJNA641144 (M_INV) tumor disease adult, ZMEL1-INV cells in vivo metastases Melanoma cells (cluster: 7)
    		 potential marker
    		 NA
    GSE176129 (pdgfrb-positive) whole body baseline 5dpf, FACS-isolated pdgfrb-positive cells Neutrophils (cluster: 31)
    Macrophages (cluster: 42)
    		 potential marker
    potential marker
    		 NA
    NA
    GSE158099 (WT) whole body baseline 2.5dpf, cd41:GFPlow-WT Multipotent cells (cluster: 6)
    Neutrophils (cluster: 9)
    		 potential marker
    potential marker
    		 NA
    NA
    GSE158099 (runx1 -|-) whole body hematopoietic 2.5dpf, cd41:GFPlow-runx1-/- Macrophages (cluster: 8)
    		 potential marker
    		 NA
    GSE158099 (runx1 -|-) whole body hematopoietic 10dpf, cd41:GFPlow-runx1-/- Neutrophils (cluster: 7)
    		 potential marker
    		 NA
    GSE158099 (runx1 -|-) whole body hematopoietic 16dpf, cd41:GFPlow-runx1-/- Macrophages (cluster: 7)
    		 potential marker
    		 NA
    GSE158099 (runx1 -|-) whole body hematopoietic 16dpf, cd41:GFPlow-runx1-/- Macrophages (cluster: 10)
    Neutrophils (cluster: 6)
    		 potential marker
    potential marker
    		 NA
    NA
    PRJNA554650 (6.5dpf) brain baseline 6.5dpf, whole brain of nr1d1:VNP fish
    GSE158142 (5dpf) brain, eye baseline 5dpf, untreatment
    GSE158142 (8dpf) brain, eye baseline 8dpf, untreatment
    PRJNA706197 (1.25dpf) embryo baseline 1.25dpf, FACS sorted sox10:nEOS cells
    PRJNA706197 (24hpf) embryo baseline 24hpf, FACS sorted sox10:nEOS cells
    GSE126647 (Pbx4-depleted) embryo growth 1.17dpf, Pbx4-depleted nkx2.5:ZsYellow+ cells
    PRJNA706197 (18hpf) embryo baseline 18hpf, FACS sorted sox10:nEOS cells
    GSE168695 (5dpf) embryo baseline 5dpf, GFP+ cells isolated from 5 dpf cldnb:lyn-EGFP embryos
    PRJNA640816 (2.9dpf) embryo baseline 2.9dpf, FACS isolated -4.9sox10:EGFP+ cells
    PRJNA564810 (1dpf) embryo baseline 1dpf, a single-cell transcriptome atlas for zebrafish development
    PRJNA706197 (20hpf) embryo baseline 20hpf, FACS sorted sox10:nEOS cells
    GSE161712 (M. marinum) granulomas disease adult, infected with bacteria of M. marinum
    GSE158142 (3dpf) head baseline 3dpf, untreatment
    GSE158142 (2dpf) head baseline 2dpf, untreatment
    PRJNA415636 (pancreas, liver) hepatopancreas baseline adult, Zebrabow M, pancreas and liver
    GSE150498 (wildtype, 2X DSS+BZA) intestine disease 6dpf, wildtype, 2X DSS+BZA
    GSE150498 (untreated ctrl) intestine baseline 6dpf, untreated ctrl
    GSE137784 (HCC, CreLox) liver disease 6mpf, male, isolated from the zebrafish without HCC
    GSE137784 (no HCC) liver baseline 6mpf, male, isolated from the CreLox zebrafish with HCC
    GSE148591 (3mpf) pituitary transplant 3mpf, graft transplantation during early embryogenesis
    GSE148591 (6mpf) pituitary baseline 6mpf, male, Sox17:CreERT2
    GSE175929 (5mpf) retina baseline 5mpf, GFP-positive cells collected from two transgenic zebrafish, Tg(rho:EGFP)ja2Tg and Tg(gnat2:EGFP)ja23Tg
    GSE122680 (2dpf) retina baseline 2dpf, WT, untreatment
    PRJNA672101 (WT) retina baseline 5mpf, three retinas from WT zebrafsih
    GSE122680 (3dpf) retina baseline 3dpf, WT, untreatment
    GSE152982 (wild type) trunk baseline 1.25dpf, untreatment
    PRJNA641144 (M_PRO) tumor disease adult, ZMEL1-PRO cells in vivo metastases
    PRJNA641144 (P_INV) tumor disease adult, ZMEL1-INV cells in vivo primary tumors
    PRJNA641144 (P_PRO) tumor disease adult, ZMEL1-PRO cells in vivo primary tumors

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