CELL TYPE: Microglia


Distribution of Microglia in Tissues/Organs

Word Cloud of All Markers


Detail Marker Information in Datasets


Dataset ID Species Tissue / Organ Cell cluster Cell type Experiment type sample Marker gene Marker class Evidence
PRJNA554650 (6.5dpf) Danio rerio brain 18 Microglia baseline 6.5dpf, whole brain of nr1d1:VNP fish ENSDARG00000040295 (apoeb) marker DOI:10.1038/nbt.4103
PRJNA415636 (brain) Danio rerio brain 4 Microglia baseline adult, Zebrabow M, brain ENSDARG00000098012 (itgae.1) marker DOI:10.1038/nbt.4124
PRJNA415636 (brain) Danio rerio brain 4 Microglia baseline adult, Zebrabow M, brain ENSDARG00000090890 (cmklr1) marker DOI:10.1038/nbt.4124
GSE158142 (8dpf) Danio rerio brain, eye 13 Microglia baseline 8dpf, untreatment ENSDARG00000040528 (lgals3bpb) marker DOI:10.1016/j.neuron.2020.09.023
GSE158142 (8dpf) Danio rerio brain, eye 13 Microglia baseline 8dpf, untreatment ENSDARG00000104077 (fcer1gl) marker DOI:10.1016/j.neuron.2020.09.023
GSE158142 (8dpf) Danio rerio brain, eye 13 Microglia baseline 8dpf, untreatment ENSDARG00000040178 (havcr1) marker DOI:10.1016/j.neuron.2020.09.023
GSE158142 (8dpf) Danio rerio brain, eye 13 Microglia baseline 8dpf, untreatment ENSDARG00000090783 (mfap4) marker DOI:10.1016/j.neuron.2020.09.023
GSE158142 (8dpf) Danio rerio brain, eye 13 Microglia baseline 8dpf, untreatment ENSDARG00000067797 (spi1a) marker DOI:10.1016/j.neuron.2020.09.023
PRJNA754013 (Choy surface) Astyanax mexicanus hypothalamus 8 Microglia baseline male, female, adult, untreatment apoc1 (apoc1) marker DOI:10.1038/s41559-021-01580-3
PRJNA754013 (Molino cave) Astyanax mexicanus hypothalamus 8 Microglia baseline male, female, adult, untreatment apoc1 (apoc1) marker DOI:10.1038/s41559-021-01580-3
PRJNA754013 (Pachon cave) Astyanax mexicanus hypothalamus 7 Microglia baseline male, female, adult, untreatment apoc1 (apoc1) marker DOI:10.1038/s41559-021-01580-3
PRJNA754013 (Tinaja cave) Astyanax mexicanus hypothalamus 11 Microglia baseline male, female, adult, untreatment apoc1 (apoc1) marker DOI:10.1038/s41559-021-01580-3
PRJNA754013 (zebrafish) Danio rerio hypothalamus 11 Microglia baseline adult, male, female, untreatment ENSDARG00000092170 (apoc1) marker DOI:10.1038/s41559-021-01580-3
PRJNA672101 (nrl-KO) Danio rerio retina 12 Microglia growth 5mpf, three retinas from nrl-KO zebrafsih ENSDARG00000023188 (lcp1) marker DOI:10.1371/journal.pgen.1009841
PRJNA672101 (nrl-KO) Danio rerio retina 12 Microglia growth 5mpf, three retinas from nrl-KO zebrafsih ENSDARG00000033735 (ncf1) marker DOI:10.1371/journal.pgen.1009841
PRJNA672101 (WT) Danio rerio retina 12 Microglia baseline 5mpf, three retinas from WT zebrafsih ENSDARG00000023188 (lcp1) marker DOI:10.1371/journal.pgen.1009841

    After clicking the magnifying glass button, the clustering and expression information of this marker gene will be displayed below.