GENE ID: ENSDARG00000053858

Symbol Location Gene type Genome version Species
crip1 17: 37385811 ~ 37395496 (-) protein_coding GRCz11 Danio rerio

  • PPI (protein-protein interaction) results are shown above.
  • Green is ENSDARG00000053858 (crip1), yellow represents other genes.
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    • MARKER



    EXPRESSION

    Dataset ID Tissue / Organ Experiment type Sample Cell type Marker class Evidence
    GSE123241 (wild type) neuromast baseline 5dpf, wild type during sensory hair cell regeneration, lateral line sensory Mantle cells (cluster: 6)
    		 marker
    		 DOI:10.7554/eLife.44431
    GSE123241 (fgf3 mutants) neuromast regeneration 5dpf, fgf3 mutants during sensory hair cell regeneration, lateral line sensory Mantle cells (cluster: 5)
    		 marker
    		 DOI:10.7554/eLife.44431
    GSE123241 (fgf3 siblings) neuromast regeneration 5dpf, fgf3 siblings during sensory hair cell regeneration, lateral line sensory Mantle cells (cluster: 5)
    		 marker
    		 DOI:10.7554/eLife.44431
    PRJNA554650 (6.5dpf) brain baseline 6.5dpf, whole brain of nr1d1:VNP fish Endothelium (cluster: 15)
    Microglia (cluster: 18)
    		 potential marker
    potential marker
    		 NA
    NA
    GSE158142 (8dpf) brain, eye baseline 8dpf, untreatment Epithelial cells (cluster: 6)
    		 potential marker
    		 NA
    GSE158142 (15dpf) brain, eye baseline 15dpf, untreatment Eye (endothelial, progenitors) (cluster: 13)
    		 potential marker
    		 NA
    GSE151354 (wild type) cartilage baseline 21dpf, wild type Melanoma cells (cluster: 9)
    		 potential marker
    		 NA
    GSE151354 (nkx3.2 mutant) cartilage growth 21dpf, nkx3.2 mutant Melanoma cells (cluster: 6)
    		 potential marker
    		 NA
    PRJNA610520 (3.5dpf) caudal hematopoietic tissue baseline 3.5dpf, the mixture of same amount of kdrl:mCherry+ cells, CD41:GFP+ cells and double negative cells. Myeloid cells (cluster: 6)
    Myeloid cells (cluster: 8)
    Epidermal cells (cluster: 9)
    		 potential marker
    potential marker
    potential marker
    		 NA
    NA
    NA
    PRJNA610520 (4.5dpf) caudal hematopoietic tissue baseline 4.5dpf, the mixture of same amount of kdrl:mCherry+ cells, CD41:GFP+ cells and double negative cells. Myeloid cells (cluster: 4)
    Myeloid cells (cluster: 7)
    		 potential marker
    potential marker
    		 NA
    NA
    GSE144944 (fgfr3 +|+) cranial vault baseline 1mpf, fgfr3 +/+ Chondrocytes (cluster: 5)
    		 potential marker
    		 NA
    GSE173972 (WT, ezh1+|+) embryo baseline 1.25dpf, Kdrl-positive embryos Neutrophils (cluster: 5)
    Macrophages (cluster: 7)
    		 potential marker
    potential marker
    		 NA
    NA
    GSE173972 (HET, ezh1+|-) embryo hematopoietic 1.25dpf, Kdrl-positive embryos Neutrophils (cluster: 6)
    Macrophages (cluster: 8)
    		 potential marker
    potential marker
    		 NA
    NA
    GSE173972 (KO, ezh1-|-) embryo hematopoietic 1.25dpf, Kdrl-positive embryos Neutrophils (cluster: 6)
    Macrophages (cluster: 8)
    		 potential marker
    potential marker
    		 NA
    NA
    GSE168695 (5dpf) embryo baseline 5dpf, GFP+ cells isolated from 5 dpf cldnb:lyn-EGFP embryos Ionocyte progenitors (cluster: 3)
    Ionocyte progenitors (cluster: 8)
    		 potential marker
    potential marker
    		 NA
    NA
    PRJNA564810 (5dpf) embryo baseline 5dpf, a single-cell transcriptome atlas for zebrafish development Multipotent cells (cluster: 14)
    Intesinal epithelial cells (cluster: 17)
    		 potential marker
    potential marker
    		 NA
    NA
    PRJNA564810 (2dpf) embryo baseline 2dpf, a single-cell transcriptome atlas for zebrafish development Monocytes (cluster: 24)
    		 potential marker
    		 NA
    PRJNA564810 (1dpf) embryo baseline 1dpf, a single-cell transcriptome atlas for zebrafish development Monocytes (cluster: 28)
    		 potential marker
    		 NA
    GSE161712 (M. marinum) granulomas disease adult, infected with bacteria of M. marinum Neutrophils (cluster: 8)
    		 potential marker
    		 NA
    GSE158142 (1.5dpf) head baseline 1.5dpf, untreatment Neutrophils (cluster: 16)
    		 potential marker
    		 NA
    PRJNA608912 (wt_unjuried) heart baseline 5mpf, wild type, uninjured Mesenchymal cells (cluster: 5)
    		 potential marker
    		 NA
    PRJNA608912 (wt_2dpi) heart regeneration 5mpf, wild type, 2 days post injury Macrophages (cluster: 2)
    		 potential marker
    		 NA
    PRJNA608912 (wt_7dpi) heart regeneration 5mpf, wild type, 7 days post injury Fibroblasts (cluster: 4)
    Mesenchymal cells (cluster: 7)
    Coronary endothelial cells (cluster: 9)
    		 potential marker
    potential marker
    potential marker
    		 NA
    NA
    NA
    PRJNA608912 (wt_14dpi) heart regeneration 5mpf, wild type, 14 days post injury Fibroblasts (cluster: 3)
    Mesenchymal cells (cluster: 8)
    		 potential marker
    potential marker
    		 NA
    NA
    PRJNA608912 (kit_uninjuried) heart regeneration 5mpf, kit mutant, uninjured Macrophages (cluster: 5)
    		 potential marker
    		 NA
    PRJNA608912 (kit_2dpi) heart regeneration 5mpf, kit mutant, 2 days post injury Macrophages (cluster: 2)
    		 potential marker
    		 NA
    PRJNA608912 (kit_7dpi) heart regeneration 5mpf, kit mutant, 7 days post injury Fibroblasts (cluster: 4)
    		 potential marker
    		 NA
    PRJNA415636 (heart, blood) heart, blood baseline adult, Zebrabow M, heart and blood Fibroblasts (cluster: 6)
    		 potential marker
    		 NA
    PRJNA415636 (pancreas, liver) hepatopancreas baseline adult, Zebrabow M, pancreas and liver Smooth muscle cells (cluster: 4)
    		 potential marker
    		 NA
    GSE150498 (untreated ctrl) intestine baseline 6dpf, untreated ctrl Enterocytes (cluster: 4)
    		 potential marker
    		 NA
    GSE150498 (DSS treated) intestine disease 6dpf, DSS treated Enterocytes (cluster: 2)
    		 potential marker
    		 NA
    GSE137784 (HCC, HepABC) liver disease 6mpf, male, isolated from the Tg(fabp10a:pt-B-cat)(HepABC) zebrafish with HCC Immune cells (cluster: 7)
    		 potential marker
    		 NA
    GSE137784 (HCC, CreLox) liver disease 6mpf, male, isolated from the zebrafish without HCC Immune cells (cluster: 4)
    		 potential marker
    		 NA
    PRJNA605021 (supporting cells) neuromast baseline 7dpf, posterior lateral-line neuromast cells were isolated from the dissociated trunks of Tg[Et(krt4:EGFP)sqgw57A] transgenic zebrafish larvae Support cells (cluster: 2)
    		 potential marker
    		 NA
    PRJNA605021 (hair cells) neuromast baseline 7dpf, posterior lateral-line neuromast cells were isolated from the dissociated trunks of Tg[myo6b:actb1-EGFP] transgenic zebrafish larvae Support cells (cluster: 4)
    		 potential marker
    		 NA
    PRJNA668529 (3d) olfactory rosette disease 3mpf, intranasal 100ng r-Spike 3 days Lymphocyte cells (cluster: 1)
    T cells (cluster: 11)
    Macrophages (cluster: 9)
    		 potential marker
    potential marker
    potential marker
    		 NA
    NA
    NA
    PRJNA668529 (3h) olfactory rosette disease 3mpf, intranasal 100ng r-Spike 3 hours Lymphocyte cells (cluster: 2)
    		 potential marker
    		 NA
    PRJNA668529 (control) olfactory rosette baseline 3mpf, intranasal PBS Lymphocyte cells (cluster: 2)
    		 potential marker
    		 NA
    GSE148591 (6mpf) pituitary baseline 6mpf, male, Sox17:CreERT2 Corticotropes (cluster: 3)
    Prop1+ group (cluster: 9)
    		 potential marker
    potential marker
    		 NA
    NA
    GSE148591 (3mpf) pituitary transplant 3mpf, graft transplantation during early embryogenesis Prop1+ group (cluster: 11)
    Endothelium (cluster: 13)
    		 potential marker
    potential marker
    		 NA
    NA
    PRJNA415636 (primary pancreatic islet) primary pancreatic islet baseline adult, Zebrabow M, primary pancreatic islet Smooth muscle cells (cluster: 10)
    		 potential marker
    		 NA
    PRJNA672101 (nrl-KO) retina growth 5mpf, three retinas from nrl-KO zebrafsih Microglia (cluster: 12)
    		 potential marker
    		 NA
    PRJNA672101 (WT) retina baseline 5mpf, three retinas from WT zebrafsih Microglia (cluster: 12)
    		 potential marker
    		 NA
    GSE131136 (all) trunk, skin baseline 5dpf, sox10:CRE positive cells from 5dpf and post-embryonic zebrafish trunks with and without thyroid hormone Schwann cells (cluster: 1)
    Schwann cell precursor (cluster: 2)
    		 potential marker
    potential marker
    		 NA
    NA
    GSE159709 (melanoma) tumor disease adult, equal numbers of sorted GFP+ (tumor) and GFP- (macroenvironment) cells Erythroid cells (cluster: 3)
    Macrophages (cluster: 4)
    		 potential marker
    potential marker
    		 NA
    NA
    PRJNA641144 (P_INV) tumor disease adult, ZMEL1-INV cells in vivo primary tumors Melanoma cells (cluster: 8)
    		 potential marker
    		 NA
    PRJNA641144 (M_INV) tumor disease adult, ZMEL1-INV cells in vivo metastases Melanoma cells (cluster: 6)
    Melanoma cells (cluster: 7)
    		 potential marker
    potential marker
    		 NA
    NA
    PRJNA641144 (M_PRO) tumor disease adult, ZMEL1-PRO cells in vivo metastases Melanoma cells (cluster: 7)
    		 potential marker
    		 NA
    GSE176129 (pdgfrb-positive) whole body baseline 5dpf, FACS-isolated pdgfrb-positive cells
    GSE158099 (runx1 -|-) whole body hematopoietic 2.5dpf, cd41:GFPlow-runx1-/- Macrophages (cluster: 8)
    		 potential marker
    		 NA
    GSE158099 (WT) whole body baseline 16dpf, cd41:GFPlow-WT Neutrophils (cluster: 5)
    		 potential marker
    		 NA
    GSE158099 (runx1 -|-) whole body hematopoietic 16dpf, cd41:GFPlow-runx1-/-
    GSE158099 (runx1 -|-) whole body hematopoietic 16dpf, cd41:GFPlow-runx1-/- Multipotent cells (cluster: 3)
    		 potential marker
    		 NA
    PRJNA415636 (brain) brain baseline adult, Zebrabow M, brain
    GSE158142 (5dpf) brain, eye baseline 5dpf, untreatment
    GSE144944 (fgfr3 -|-) cranial vault growth 1mpf, fgfr3 -/-
    GSE130526 (fin) dorsal and anal fin baseline adult, fins were amputated from fish expressing both pnp4a:palmmCherry and tyrp1b:palmmCherry
    PRJNA640816 (2dpf) embryo baseline 2dpf, FACS isolated -4.9sox10:EGFP+ cells
    PRJNA734348 (shield, dnmt1) embryo growth 6hpf, shield, oocyte microinjection with Rhodamine B and dnmt1 MO at oogenesis III stage (GV)
    PRJNA734348 (dome, control) embryo baseline 4.3hpf, dome, oocyte microinjection with Rhodamine B and control MO at oogenesis III stage (GV)
    GSE106587 (WT) embryo baseline 12hpf, 6 somites, wild-type TLAB embryo
    GSE126647 (control) embryo baseline 1.17dpf, control nkx2.5:ZsYellow+ cells
    PRJNA706197 (24hpf) embryo baseline 24hpf, FACS sorted sox10:nEOS cells
    PRJNA656271 (24hpf) embryo baseline 24hpf, FACS-isolated EGFP+ cells
    PRJNA640816 (2.9dpf) embryo baseline 2.9dpf, FACS isolated -4.9sox10:EGFP+ cells
    PRJNA734348 (dome, dnmt1) embryo growth 4.3hpf, dome, oocyte microinjection with Rhodamine B and dnmt1 MO at oogenesis III stage (GV)
    GSE106587 (MZoep mutant) embryo baseline 12hpf, 6 somites, maternal zygotic oep tz57 mutant embryo
    GSE158849 (labeled) embryo baseline 6hpf, WT, 4sUTP injected (labeled)
    GSE126647 (Pbx4-depleted) embryo growth 1.17dpf, Pbx4-depleted nkx2.5:ZsYellow+ cells
    PRJNA706197 (1.25dpf) embryo baseline 1.25dpf, FACS sorted sox10:nEOS cells
    PRJNA656271 (1.5dpf) embryo baseline 1.5dpf, FACS-isolated EGFP+ cells
    PRJNA706197 (14hpf) embryo baseline 14hpf, FACS sorted sox10:nEOS cells
    GSE158849 (unlabeled) embryo baseline 6hpf, WT, 4sUTP injected (unlabeled)
    PRJNA734348 (shield, control) embryo baseline 6hpf, shield, oocyte microinjection with Rhodamine B and control MO at oogenesis III stage (GV)
    PRJNA706197 (18hpf) embryo baseline 18hpf, FACS sorted sox10:nEOS cells
    PRJNA706197 (20hpf) embryo baseline 20hpf, FACS sorted sox10:nEOS cells
    PRJNA656271 (2dpf) embryo baseline 2dpf, FACS-isolated EGFP+ cells
    GSE158142 (24hpf) head baseline 24hpf, untreatment
    GSE158142 (16hpf) head baseline 16hpf, 14 somites, untreatment